ModCRE DB

Transcription factor

O43364 - HOXA2

Homeobox protein Hox-A2 (Homeobox protein Hox-1K)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 376 aa

13 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known13
MotifPredictionSourceDNA bindingSupportLogoActions
MA0900.1 Known JASPAR CCTAATTACC Direct PWM Open · Scan
MA0900.2 Known JASPAR GTAATTAG Direct PWM Open · Scan
MA0900.3 Known JASPAR TAATTA Direct PWM Open · Scan
MA1948.1 Known JASPAR AGCGGAAGTAATTA Direct PWM Open · Scan
MA1948.2 Known JASPAR CGGAAGTAATTA Direct PWM Open · Scan
M02083_2.00 Known CisBP CCTAATGAG Direct PWM Open · Scan
M03097_2.00 Known CisBP GGTAATTAGG Direct PWM Open · Scan
M04962_2.00 Known CisBP CTAATTAC Direct PWM Open · Scan
M04963_2.00 Known CisBP CTAATTAC Direct PWM Open · Scan
M04964_2.00 Known CisBP TTAATGAC Direct PWM Open · Scan
M04965_2.00 Known CisBP CTAATTAC Direct PWM Open · Scan
M04966_2.00 Known CisBP CTAATTAC Direct PWM Open · Scan
M04967_2.00 Known CisBP CTAATGAC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 376 aa
144-203

Region 144-203 0 PWM

Residues
60 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
5ZJR
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 144-2031 model
Actions
Predicted = Low DIMER_O43364:144:203_5zjr_A_1 5zjr 144-203 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
144-200PF00046Homeodomainoverlaps 144-203