ModCRE DB

Transcription factor

O43435 - TBX1

T-box transcription factor TBX1 (T-box protein 1) (Testis-specific T-box protein)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 398 aa

8 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known8
MotifPredictionSourceDNA bindingSupportLogoActions
MA0805.1 Known JASPAR AGGTGTGA Direct PWM Open · Scan
M03570_2.00 Known CisBP AGGTGTGAAAAAAGGTGTGA Direct PWM Open · Scan
M03571_2.00 Known CisBP AGGTGTGAAATTCACACCT Direct PWM Open · Scan
M03572_2.00 Known CisBP AGGTGTGA Direct PWM Open · Scan
M03573_2.00 Known CisBP TCTCACACCTCTGAGGTGTGAAA Direct PWM Open · Scan
M03574_2.00 Known CisBP TTCACACCTAGAGGTGTGAA Direct PWM Open · Scan
M05821_2.00 Known CisBP GAAGGTGTGAAA Direct PWM Open · Scan
M05822_2.00 Known CisBP GGAGGTGTGAAT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 398 aa
109-296

Region 109-296 0 PWM

Residues
188 aa
Domains
PF00907 · T-box
3D models
1 active PDB
Templates
4S0H
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 109-2961 model
Actions
Predicted = Low DIMER_O43435:109:296_4s0h_E_1 4s0h 109-296 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
112-297PF00907T-boxoverlaps 109-296