ModCRE DB

Transcription factor

O43638 - FOXS1

Forkhead box protein S1 (Forkhead-like 18 protein) (Forkhead-related transcription factor 10) (FREAC-10)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 330 aa

53 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
MA2118.1 Known JASPAR TGTAAACA Direct PWM Open · Scan
Nearest Neighbor (>70%)7
MotifPredictionSourceDNA bindingSupportLogoActions
M03034_2.00 NN 70+% CisBP GTAAACA 78.7% identity Open · Scan
MA0846.1 NN 70+% JASPAR TAAGTAAACAAA 77.0% identity Open · Scan
MA0033.1 NN 70+% JASPAR TATACATA 73.4% identity Open · Scan
M10571_2.00 NN 70+% CisBP AAAAATAAATATAAGG 71.8% identity Open · Scan
M01982_2.00 NN 70+% CisBP TATGTAAACA 71.6% identity Open · Scan
MA0032.1 NN 70+% JASPAR GGTAAGTA 71.6% identity Open · Scan
M00164_2.00 NN 70+% CisBP AATGTAAACA 71.2% identity Open · Scan
Nearest Neighbor (70% - 40%)45
MotifPredictionSourceDNA bindingSupportLogoActions
MA0031.1 NN 70-40% JASPAR GTAAACAT 69.0% identity Open · Scan
M04848_2.00 NN 70-40% CisBP AACGTCAACAC 68.4% identity Open · Scan
MA1607.1 NN 70-40% JASPAR AATATGTAAACAAA 68.4% identity Open · Scan
M10570_2.00 NN 70-40% CisBP CTTAAGTAAACAATGG 68.0% identity Open · Scan
MA0041.1 NN 70-40% JASPAR GAATGTTTGTTT 67.6% identity Open · Scan
MA1487.1 NN 70-40% JASPAR CCTTAAATAAACAAT 67.6% identity Open · Scan
M01990_2.00 NN 70-40% CisBP TTGTTTACA 66.2% identity Open · Scan
MA0847.1 NN 70-40% JASPAR GTAAACA 65.8% identity Open · Scan
M03741_2.00 NN 70-40% CisBP TTATGTAAACAAT 65.6% identity Open · Scan
M09104_2.00 NN 70-40% CisBP CCTTGTTTACTTT 64.9% identity Open · Scan
MA0047.2 NN 70-40% JASPAR TGTTTACTTAGG 64.9% identity Open · Scan
MA0047.3 NN 70-40% JASPAR ATGTAAACATA 64.9% identity Open · Scan
M03735_2.00 NN 70-40% CisBP AAACAATAATATT 63.9% identity Open · Scan
MA0047.1 NN 70-40% JASPAR CAATATTTACTT 63.9% identity Open · Scan
M10565_2.00 NN 70-40% CisBP AAACAAACAATC 63.8% identity Open · Scan
M04827_2.00 NN 70-40% CisBP GTAATGTAAACAA 63.7% identity Open · Scan
M09669_2.00 NN 70-40% CisBP ATGTAAACACACC 63.5% identity Open · Scan
MA0042.1 NN 70-40% JASPAR GGATGTTTGTTT 63.5% identity Open · Scan
M03743_2.00 NN 70-40% CisBP TATGTAAATATTTACATA 62.8% identity Open · Scan
M01983_2.00 NN 70-40% CisBP TGTTTACATA 62.3% identity Open · Scan
MA0845.1 NN 70-40% JASPAR TATGTAAATAT 62.3% identity Open · Scan
M00791_2.00 NN 70-40% CisBP ATGTAAACAA 62.2% identity Open · Scan
MA0613.1 NN 70-40% JASPAR GTAAACAA 62.2% identity Open · Scan
MA0030.1 NN 70-40% JASPAR CAAACGTAAACAAT 61.9% identity Open · Scan
MA1606.1 NN 70-40% JASPAR ATGTAAACAAA 61.9% identity Open · Scan
MA0148.1 NN 70-40% JASPAR TGTTTACTTTG 61.6% identity Open · Scan
M03046_2.00 NN 70-40% CisBP GTAAACAA 61.5% identity Open · Scan
MA0851.1 NN 70-40% JASPAR AAAAAGTAAACAAACAC 61.5% identity Open · Scan
M03058_2.00 NN 70-40% CisBP GTAAACATAAACA 60.5% identity Open · Scan
M10528_2.00 NN 70-40% CisBP ATAATAATATTTTT 59.5% identity Open · Scan
MA0614.1 NN 70-40% JASPAR GTAAACAA 59.5% identity Open · Scan
M01974_2.00 NN 70-40% CisBP GTAAACAA 59.2% identity Open · Scan
M09093_2.00 NN 70-40% CisBP AAATAAACAATA 57.1% identity Open · Scan
MA0040.1 NN 70-40% JASPAR TATTGTTTATT 56.4% identity Open · Scan
M01987_2.00 NN 70-40% CisBP GTAAACAAA 55.2% identity Open · Scan
M01016_2.00 NN 70-40% CisBP TGGACGCTAA 54.8% identity Open · Scan
M01002_2.00 NN 70-40% CisBP TAAACAA 54.4% identity Open · Scan
M00664_2.00 NN 70-40% CisBP ATAAACAA 54.0% identity Open · Scan
MA0852.1 NN 70-40% JASPAR AAAATGTAAACAAACAG 51.5% identity Open · Scan
M01003_2.00 NN 70-40% CisBP GTAAACAA 51.2% identity Open · Scan
MA0479.1 NN 70-40% JASPAR TCCAATCCACA 50.6% identity Open · Scan
M00045_2.00 NN 70-40% CisBP GTAAACAA 50.5% identity Open · Scan
MA0852.2 NN 70-40% JASPAR AATGTAAACAAGGC 50.5% identity Open · Scan
MA1103.1 NN 70-40% JASPAR ATGTAAACAAG 50.5% identity Open · Scan
M01991_2.00 NN 70-40% CisBP ATTGTAAACAAA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 330 aa
18-79

Region 18-79 0 PWM

Residues
62 aa
Domains
PF00250 · Forkhead domain
3D models
1 active PDB
Templates
2A07
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 18-791 model
Actions
Predicted = Low DIMER_O43638:18:79_2a07_F_1 2a07 18-79 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
18-103PF00250Forkhead domainoverlaps 18-79