ModCRE DB

Transcription factor

O43680 - TCF21

Transcription factor 21 (TCF-21) (Capsulin) (Class A basic helix-loop-helix protein 23) (bHLHa23) (Epicardin) (Podocyte-expressed 1) (Pod-1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 179 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known6
MotifPredictionSourceDNA bindingSupportLogoActions
MA1568.1 Known JASPAR CACCATATGGCG Direct PWM Open · Scan
MA1568.2 Known JASPAR ACCATATGGC Direct PWM Open · Scan
M04092_2.00 Known CisBP CAACAGCTGTTA Direct PWM Open · Scan
M04093_2.00 Known CisBP CACCATATGGCG Direct PWM Open · Scan
M04094_2.00 Known CisBP CAACAGCTGTTG Direct PWM Open · Scan
M04095_2.00 Known CisBP CACCATATGGCG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 179 aa
77-135

Region 77-135 0 PWM

Residues
59 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
2YPB
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 77-1351 model
Actions
Predicted = Low DIMER_O43680:77:135_2ypb_A_1 2ypb 77-135 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
80-132PF00010Helix-loop-helix DNA-binding domainoverlaps 77-135