ModCRE DB

Transcription factor

O43918 - AIRE

Autoimmune regulator (Autoimmune polyendocrinopathy candidiasis ectodermal dystrophy protein) (APECED protein)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 545 aa

3 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known2
MotifPredictionSourceDNA bindingSupportLogoActions
M09375_2.00 Known CisBP TTAACCAATAAAACCAAT Direct PWM Open · Scan
AIRE_HUMAN.H11MO.0.C Known HOCOMOCO ATTGGTTATATTGGTTAA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M01680_2.00 NN 70-40% CisBP AAAATAAA 50.7% identity Open · Scan
ModCRE0

No generated PWM in this category.

No DNA-interacting structure identified

None of the 6 assessable structural models contains a protein–DNA non-hydrogen atom contact within 4.5 Å.

3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models
SourceModelTemplateResidues modeledActions
Predicted = Lowo43918.af3.0-Full sequenceView model · PDB
Predicted = Lowo43918.af3.1-Full sequenceView model · PDB
Predicted = Lowo43918.af3.2-Full sequenceView model · PDB
Predicted = Lowo43918.af3.3-Full sequenceView model · PDB
Predicted = Lowo43918.af3.4-Full sequenceView model · PDB
Predicted = Lowo43918.af3.5-Full sequenceView model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomain
4-102PF03172HSR domain
204-244PF01342SAND domain
299-340PF00628PHD-finger