Transcription factor

O60248 - SOX15

Transcription factor SOX-15 (Protein SOX-12) (Protein SOX-20) (SRY-box transcription factor 15)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 233 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known6

Motif	Prediction	Source	DNA binding	Support	Actions
MA1152.1	Known	JASPAR	CTATTGTTTT	Direct PWM	Open · Scan
MA1152.2	Known	JASPAR	CTATTGT	Direct PWM	Open · Scan
M03508_2.00	Known	CisBP	AACAATAACATTGTT	Direct PWM	Open · Scan
M03509_2.00	Known	CisBP	ATCAATAACATTGAT	Direct PWM	Open · Scan
M03510_2.00	Known	CisBP	ATGAATAACATTCAT	Direct PWM	Open · Scan
M05893_2.00	Known	CisBP	CTATTGTTTT	Direct PWM	Open · Scan

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 233 aa

47-119

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 47-1191 model

				Actions
Predicted = Low	TFS_O60248:47:119_1hrz_A_1	1hrz	47-119	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
49-117	PF00505	HMG (high mobility group) box	overlaps 47-119