ModCRE DB

Transcription factor

O60481 - ZIC3

Zinc finger protein ZIC 3 (Zinc finger protein 203) (Zinc finger protein of the cerebellum 3)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 467 aa

9 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known9
MotifPredictionSourceDNA bindingSupportLogoActions
MA0697.1 Known JASPAR GACCCCCCGCTGCGC Direct PWM Open · Scan
M02894_2.00 Known CisBP GACCCCCCGCTGCGC Direct PWM Open · Scan
M04491_2.00 Known CisBP AGACCCCCCGCTGTGA Direct PWM Open · Scan
M04492_2.00 Known CisBP AGACCCCCTGCTGTGC Direct PWM Open · Scan
M04493_2.00 Known CisBP GACCCCCCGCTGTGC Direct PWM Open · Scan
M04494_2.00 Known CisBP GACCCCCTGCTGTGC Direct PWM Open · Scan
M08902_2.00 Known CisBP GGCCCCCTGCTGTGA Direct PWM Open · Scan
M10229_2.00 Known CisBP GACCACCCA Direct PWM Open · Scan
ZIC3_HUMAN.H11MO.0.B Known HOCOMOCO GGCCCCCTGCTGTGA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 467 aa
268-408

Region 268-408 0 PWM

Residues
141 aa
Domains
PF18366 · Zic proteins zinc finger domain PF23561 · C2H2 zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
2GLI
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 268-4081 model
Actions
Predicted = Low TFS_O60481:268:408_2gli_A_1 2gli 268-408 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
244-290PF18366Zic proteins zinc finger domainoverlaps 268-408
297-326PF23561C2H2 zinc fingeroverlaps 268-408
328-352PF00096Zinc finger, C2H2 typeoverlaps 268-408
358-382PF00096Zinc finger, C2H2 typeoverlaps 268-408
388-410PF00096Zinc finger, C2H2 typeoverlaps 268-408