ModCRE DB

Transcription factor

O60682 - MSC

Musculin (Activated B-cell factor 1) (ABF-1) (Class A basic helix-loop-helix protein 22) (bHLHa22)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 206 aa

10 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known10
MotifPredictionSourceDNA bindingSupportLogoActions
MA0665.1 Known JASPAR AACAGCTGTT Direct PWM Open · Scan
M02801_2.00 Known CisBP AACAGCTGTT Direct PWM Open · Scan
M04183_2.00 Known CisBP CAACAGCTGTTA Direct PWM Open · Scan
M04184_2.00 Known CisBP CACCATATGGTA Direct PWM Open · Scan
M04185_2.00 Known CisBP TAACAGCTGTTG Direct PWM Open · Scan
M04186_2.00 Known CisBP CACCATATGGTG Direct PWM Open · Scan
M04187_2.00 Known CisBP CAACAGCTGTTG Direct PWM Open · Scan
M04188_2.00 Known CisBP CACCATATGGTG Direct PWM Open · Scan
M04189_2.00 Known CisBP CAACAGCTGTTG Direct PWM Open · Scan
M04190_2.00 Known CisBP CACCATATGGTG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 206 aa
105-165

Region 105-165 0 PWM

Residues
61 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
2YPA
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 105-1651 model
Actions
Predicted = Low DIMER_O60682:105:165_2ypa_A_1 2ypa 105-165 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
108-160PF00010Helix-loop-helix DNA-binding domainoverlaps 105-165