ModCRE DB

Transcription factor

O75398 - DEAF1

Deformed epidermal autoregulatory factor 1 homolog (Nuclear DEAF-1-related transcriptional regulator) (NUDR) (Suppressin) (Zinc finger MYND domain-containing protein 5)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 565 aa

7 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M07544_2.00 NN 70-40% CisBP CACGAA 53.7% identity Open · Scan
ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_sp_O75398_DEAF1_HUMAN:501:540_4oor_A_1 ModCRE Homology model GAATTCAATTTGATCTC Region 501-540 · 1 3D model Open · Scan
DIMER_sp_O75398_DEAF1_HUMAN:501:540_4ov7_A_1 ModCRE Homology model GAATTCAATTTTATCTC Region 501-540 · 1 3D model Open · Scan
DIMER_sp_O75398_DEAF1_HUMAN:501:540_5cc0_B_1 ModCRE Homology model TTGTCATATATCAATA Region 501-540 · 1 3D model Open · Scan
DIMER_sp_O75398_DEAF1_HUMAN:504:540_4tnt_B_1 ModCRE Homology model GAGATCAAATTTTTATC Region 504-540 · 1 3D model Open · Scan
DIMER_sp_O75398_DEAF1_HUMAN:504:552_3cbb_A_1 ModCRE Homology model CATTTTGGTATTTTGTCTTT Region 504-552 · 1 3D model Open · Scan
TFS_sp_O75398_DEAF1_HUMAN:504:552_3cbb_A_1 ModCRE Homology model AAAGACAAAATACCAAAATG Region 504-552 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 565 aa
501-552

Region 501-552 6 PWM

Residues
52 aa
Domains
PF01753 · MYND finger
3D models
6 active PDBs · 2 summary rows
Templates
3CBB, 4OOR, 4OV7, 4TNT, 5CC0
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 2 summary rows
Region 501-5526 models · 2 summary rows
Actions
Predicted = Low DIMER_sp_O75398_DEAF1_HUMAN:501:540_4oor_A_1 4oor 501-540 View model · PDB
Predicted = Low DIMER_sp_O75398_DEAF1_HUMAN:501:540_4ov7_A_1 4ov7 501-540 View model · PDB
Predicted = Low DIMER_sp_O75398_DEAF1_HUMAN:501:540_5cc0_B_1 5cc0 501-540 View model · PDB
Predicted = Low DIMER_sp_O75398_DEAF1_HUMAN:504:540_4tnt_B_1 4tnt 504-540 View model · PDB
Predicted = Low DIMER_sp_O75398_DEAF1_HUMAN:504:552_3cbb_A_1 3cbb 504-552 View model · PDB
Predicted = Low TFS_sp_O75398_DEAF1_HUMAN:504:552_3cbb_A_1 3cbb 504-552 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 3cbb 504:552 504,504 552,552 P:A,B · DNA:C,D 28.6% / 40.8% 64,62 View · PDB DIMER_sp_O75398_DEAF1_HUMAN:504:552_3cbb_A_1
1 3cbb 504:552 504,504 552,552 P:A,B · DNA:C,D 28.6% / 40.8% 64,62 View · PDB TFS_sp_O75398_DEAF1_HUMAN:504:552_3cbb_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
200-272PF01342SAND domainNo overlap with loaded model regions
504-540PF01753MYND fingeroverlaps 501-552