ModCRE DB

Transcription factor

O75469 - NR1I2

Nuclear receptor subfamily 1 group I member 2 (Orphan nuclear receptor PAR1) (Orphan nuclear receptor PXR) (Pregnane X receptor) (Steroid and xenobiotic receptor) (SXR)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 434 aa

7 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known7
MotifPredictionSourceDNA bindingSupportLogoActions
MA1533.1 Known JASPAR ATGAACTCGATGAACTC Direct PWM Open · Scan
MA1533.2 Known JASPAR TGAACTCGATGAACT Direct PWM Open · Scan
M03925_2.00 Known CisBP AGTTCATTGAGTTCA Direct PWM Open · Scan
M05625_2.00 Known CisBP GAGTTCATCGAGTTCAT Direct PWM Open · Scan
M05626_2.00 Known CisBP GAGTTCATTGAGTTCGT Direct PWM Open · Scan
M09283_2.00 Known CisBP TGAGGTCAAAAAAGTTCAG Direct PWM Open · Scan
NR1I2_HUMAN.H11MO.0.C Known HOCOMOCO TGAGGTCAAAAAAGTTCAG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 434 aa
38-131

Region 38-131 0 PWM

Residues
94 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
1 active PDB
Templates
1KB6
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 38-1311 model
Actions
Predicted = Low DIMER_O75469:38:131_1kb6_B_1 1kb6 38-131 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
40-109PF00105Double treble clef zinc finger, C4 typeoverlaps 38-131
243-411PF00104Ligand-binding domain of nuclear hormone receptorNo overlap with loaded model regions