ModCRE DB

Transcription factor

O75820 - ZNF189

Zinc finger protein 189

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 626 aa

65 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known4
MotifPredictionSourceDNA bindingSupportLogoActions
MA1725.1 Known JASPAR CATGCTGTTCCCT Direct PWM Open · Scan
MA1725.2 Known JASPAR TGCTGTTCC Direct PWM Open · Scan
M07589_2.00 Known CisBP CTTCCCTTCCCG Direct PWM Open · Scan
M08244_2.00 Known CisBP TGGAAAA Direct PWM Open · Scan
Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M08311_2.00 NN 70+% CisBP CTGGAACAGAAGGGGCGA 97.7% identity Open · Scan
Nearest Neighbor (70% - 40%)60
MotifPredictionSourceDNA bindingSupportLogoActions
M00959_2.00 NN 70-40% CisBP GCCCTCCC 69.0% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 69.0% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 68.6% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 67.8% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 67.8% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 67.0% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 67.0% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 66.6% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 66.2% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 65.4% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 64.2% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 63.7% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 63.3% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 62.6% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 61.8% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 59.4% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 58.9% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 58.9% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 58.2% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 58.1% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 58.1% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 57.1% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 57.1% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 56.8% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 56.2% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 56.2% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 55.9% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 55.9% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 55.6% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 55.5% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 55.2% identity Open · Scan
M08263_2.00 NN 70-40% CisBP ATCTCGGCACTTTGGGAGGCCA 54.9% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 54.8% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 54.8% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 54.3% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 54.1% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 54.1% identity Open · Scan
M08949_2.00 NN 70-40% CisBP TTCTATTTCTTCTTGTGTCA 53.8% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 53.7% identity Open · Scan
M10391_2.00 NN 70-40% CisBP TACCCCACATTTATTTA 53.5% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 53.3% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 53.1% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 52.7% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 52.7% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 52.6% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 52.5% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 52.4% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 51.6% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 51.4% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 50.9% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 50.9% identity Open · Scan
M00645_2.00 NN 70-40% CisBP CGCCCACGCA 50.6% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 50.6% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 50.5% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 50.1% identity Open · Scan
M00217_2.00 NN 70-40% CisBP TTACTCAATAT 50.0% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 50.0% identity Open · Scan
M08320_2.00 NN 70-40% CisBP TTCCCTGCC 50.0% identity Open · Scan
M08540_2.00 NN 70-40% CisBP CCCCT 50.0% identity Open · Scan
MA0493.1 NN 70-40% JASPAR GGCCACACCCA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 626 aa
145-423

Region 145-423 0 PWM

Residues
279 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 145-4231 model
Actions
Predicted = Low TFS_O75820:145:423_5wjq_D_1 5wjq 145-423 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
14-54PF01352KRAB boxNo overlap with loaded model regions
148-170PF00096Zinc finger, C2H2 typeoverlaps 145-423
176-198PF00096Zinc finger, C2H2 typeoverlaps 145-423
204-226PF00096Zinc finger, C2H2 typeoverlaps 145-423
232-254PF00096Zinc finger, C2H2 typeoverlaps 145-423
260-282PF00096Zinc finger, C2H2 typeoverlaps 145-423
288-310PF00096Zinc finger, C2H2 typeoverlaps 145-423
316-338PF00096Zinc finger, C2H2 typeoverlaps 145-423
346-366PF00096Zinc finger, C2H2 typeoverlaps 145-423
372-394PF00096Zinc finger, C2H2 typeoverlaps 145-423
400-422PF00096Zinc finger, C2H2 typeoverlaps 145-423
456-478PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
484-506PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
512-534PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
540-562PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
568-590PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions