ModCRE DB

Transcription factor

O95231 - VENTX

Homeobox protein VENTX (VENT homeobox homolog) (VENT-like homeobox protein 2)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 258 aa

10 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known10
MotifPredictionSourceDNA bindingSupportLogoActions
MA0724.1 Known JASPAR ACCGATTAG Direct PWM Open · Scan
M00303_2.00 Known CisBP GCTAATTACTG Direct PWM Open · Scan
M00304_2.00 Known CisBP AATATATAT Direct PWM Open · Scan
M00305_2.00 Known CisBP GTAATTAG Direct PWM Open · Scan
M02091_2.00 Known CisBP TTAATTAG Direct PWM Open · Scan
M03169_2.00 Known CisBP CTAATCGGT Direct PWM Open · Scan
M03170_2.00 Known CisBP CGCTAATCGGAAAACGATTAG Direct PWM Open · Scan
M05188_2.00 Known CisBP CGATAATCG Direct PWM Open · Scan
M05189_2.00 Known CisBP GCTAATTACC Direct PWM Open · Scan
M05190_2.00 Known CisBP GCTAATTACG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 258 aa
93-148

Region 93-148 0 PWM

Residues
56 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
1HDD
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 93-1481 model
Actions
Predicted = Low DIMER_O95231:93:148_1hdd_D_1 1hdd 93-148 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
93-148PF00046Homeodomainoverlaps 93-148