ModCRE DB

Transcription factor

O95238 - SPDEF

SAM pointed domain-containing Ets transcription factor (Prostate epithelium-specific Ets transcription factor) (Prostate-specific Ets) (Prostate-derived Ets factor)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 335 aa

13 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known13
MotifPredictionSourceDNA bindingSupportLogoActions
MA0686.1 Known JASPAR ACCCGGATGTA Direct PWM Open · Scan
MA0686.2 Known JASPAR ACCCGGATGT Direct PWM Open · Scan
M02973_2.00 Known CisBP ACCCGGATGTA Direct PWM Open · Scan
M02974_2.00 Known CisBP ATAATCCGGGACCAC Direct PWM Open · Scan
M02975_2.00 Known CisBP GCAGTAAGAAGTATAC Direct PWM Open · Scan
M02976_2.00 Known CisBP ACCCGGATGTA Direct PWM Open · Scan
M02977_2.00 Known CisBP ATGATCCGGGACCAC Direct PWM Open · Scan
M02978_2.00 Known CisBP GCAGAAAGAAGTAACA Direct PWM Open · Scan
M04748_2.00 Known CisBP GAACCGGATGTA Direct PWM Open · Scan
M04749_2.00 Known CisBP GAACAGGATGTG Direct PWM Open · Scan
M04750_2.00 Known CisBP GACCCGGATGTG Direct PWM Open · Scan
M04751_2.00 Known CisBP GAACCGGATGTA Direct PWM Open · Scan
M09530_2.00 Known CisBP ACCAGGATGT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 335 aa
248-332

Region 248-332 0 PWM

Residues
85 aa
Domains
PF00178 · Ets-domain
3D models
1 active PDB
Templates
2NNY
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 248-3321 model
Actions
Predicted = Low DIMER_O95238:248:332_2nny_B_1 2nny 248-332 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
132-212PF02198Sterile alpha motif (SAM)/Pointed domainNo overlap with loaded model regions
249-332PF00178Ets-domainoverlaps 248-332