ModCRE DB

Transcription factor

O95416 - SOX14

Transcription factor SOX-14 (Protein SOX-28)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 240 aa

9 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known9
MotifPredictionSourceDNA bindingSupportLogoActions
MA1562.1 Known JASPAR CCGAACAATG Direct PWM Open · Scan
MA1562.2 Known JASPAR CGAACAATG Direct PWM Open · Scan
M03513_2.00 Known CisBP ACAATAACATTG Direct PWM Open · Scan
M03514_2.00 Known CisBP ATGAATAACATTCAT Direct PWM Open · Scan
M03515_2.00 Known CisBP TCAATAACATTGA Direct PWM Open · Scan
M05783_2.00 Known CisBP CCATTGTGCG Direct PWM Open · Scan
M05784_2.00 Known CisBP CCATTGTTAG Direct PWM Open · Scan
M05785_2.00 Known CisBP CCGAACAATG Direct PWM Open · Scan
M05786_2.00 Known CisBP CATTGTTCGG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 240 aa
6-78

Region 6-78 0 PWM

Residues
73 aa
Domains
PF00505 · HMG (high mobility group) box PF12336 · SOX transcription factor
3D models
1 active PDB
Templates
1HRY
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 6-781 model
Actions
Predicted = Low TFS_O95416:6:78_1hry_A_1 1hry 6-78 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
8-76PF00505HMG (high mobility group) boxoverlaps 6-78
77-183PF12336SOX transcription factoroverlaps 6-78