ModCRE DB

Transcription factor

O95641

Putative zinc finger protein H140

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 73 aa

61 Generated PWM 5 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)56
MotifPredictionSourceDNA bindingSupportLogoActions
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 59.3% identity Open · Scan
M04515_2.00 NN 70-40% CisBP TATGCTATAACAAGCAGCCCC 58.8% identity Open · Scan
M08263_2.00 NN 70-40% CisBP ATCTCGGCACTTTGGGAGGCCA 58.3% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 55.8% identity Open · Scan
M07595_2.00 NN 70-40% CisBP GCCTGTTCCTCTCCC 55.8% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 55.8% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 55.8% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 55.8% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 55.8% identity Open · Scan
M08386_2.00 NN 70-40% CisBP GCCTTAAAAGCTCAGCAC 55.1% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 54.2% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 53.1% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 53.1% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 53.1% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 53.1% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 53.1% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 52.9% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 52.9% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 52.9% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 52.9% identity Open · Scan
M08312_2.00 NN 70-40% CisBP ATTGGGTTTCTGTTGCTT 52.9% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 52.9% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 52.9% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 52.9% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 52.9% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 52.9% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 51.4% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 51.4% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 51.3% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 51.3% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 50.0% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 50.0% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 50.0% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 50.0% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 50.0% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 50.0% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 50.0% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 50.0% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 50.0% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 50.0% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 50.0% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 50.0% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 50.0% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 50.0% identity Open · Scan
M07691_2.00 NN 70-40% CisBP CCTGCAGCCACCTTGGCCTTG 50.0% identity Open · Scan
M07693_2.00 NN 70-40% CisBP CTCCTGTGTGTGCCTTGGCTG 50.0% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 50.0% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 50.0% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 50.0% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 50.0% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 50.0% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 50.0% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 50.0% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 50.0% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 50.0% identity Open · Scan
MA1652.1 NN 70-40% JASPAR GGAGGAGGTGAGAA 50.0% identity Open · Scan
ModCRE5
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_O95641_O95641_HUMAN:24:72_2i13_A_1 ModCRE Homology model ACTCCCCGGAGTAA Region 24-72 · 1 3D model Open · Scan
TFS_tr_O95641_O95641_HUMAN:36:72_5egb_A_1 ModCRE Homology model GCCCCCCGGGGGGGA Region 36-72 · 1 3D model Open · Scan
TFS_tr_O95641_O95641_HUMAN:36:72_5eh2_F_1 ModCRE Homology model GCCCCCTCCGGGGTA Region 36-72 · 1 3D model Open · Scan
TFS_tr_O95641_O95641_HUMAN:36:72_5ei9_E_1 ModCRE Homology model TCCCCCGGCGGGGGC Region 36-72 · 1 3D model Open · Scan
TFS_tr_O95641_O95641_HUMAN:39:72_5wjq_D_1 ModCRE Homology model GGAAACCCTAT Region 39-72 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 73 aa
24-72

Region 24-72 5 PWM

Residues
49 aa
Domains
No overlapping PFAM annotation recorded
3D models
5 active PDBs · 5 summary rows
Templates
2I13, 5EGB, 5EH2, 5EI9, 5WJQ
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
5 active PDB models 5 summary rows
Region 24-725 models · 5 summary rows
Actions
Predicted = Low TFS_tr_O95641_O95641_HUMAN:24:72_2i13_A_1 2i13 24-72 View model · PDB
Predicted = Low TFS_tr_O95641_O95641_HUMAN:36:72_5egb_A_1 5egb 36-72 View model · PDB
Predicted = Low TFS_tr_O95641_O95641_HUMAN:36:72_5eh2_F_1 5eh2 36-72 View model · PDB
Predicted = Low TFS_tr_O95641_O95641_HUMAN:36:72_5ei9_E_1 5ei9 36-72 View model · PDB
Predicted = Low TFS_tr_O95641_O95641_HUMAN:39:72_5wjq_D_1 5wjq 39-72 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
5 5wjq 5:73 39 72 P:D · DNA:A,B 50.0% / 64.7% 11 View · PDB TFS_tr_O95641_O95641_HUMAN:39:72_5wjq_D_1
1 5eh2 5:73 36 72 P:F · DNA:C,D 45.9% / 56.8% 33 View · PDB TFS_tr_O95641_O95641_HUMAN:36:72_5eh2_F_1
2 5ei9 5:73 36 72 P:E · DNA:A,B 45.9% / 56.8% 32 View · PDB TFS_tr_O95641_O95641_HUMAN:36:72_5ei9_E_1
3 5egb 5:73 36 72 P:A · DNA:C,D 45.9% / 56.8% 32 View · PDB TFS_tr_O95641_O95641_HUMAN:36:72_5egb_A_1
4 2i13 5:73 24 72 P:A · DNA:C,D 38.8% / 57.1% 31 View · PDB TFS_tr_O95641_O95641_HUMAN:24:72_2i13_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Imported domain tags2
zf-C2H2zf-H2C2_2