ModCRE DB

Transcription factor

O95780 - ZNF682

Zinc finger protein 682

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 498 aa

4 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known4
MotifPredictionSourceDNA bindingSupportLogoActions
MA1599.1 Known JASPAR CGGGCCAAGCCCCTAT Direct PWM Open · Scan
MA1599.2 Known JASPAR GGCCAAGCCCC Direct PWM Open · Scan
M05858_2.00 Known CisBP GGCTAAGCCCC Direct PWM Open · Scan
M07718_2.00 Known CisBP CCCCCCCCCGGGCCAAGCCCC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 498 aa
169-448

Region 169-448 0 PWM

Residues
280 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 169-4481 model
Actions
Predicted = Low TFS_O95780:169:448_5wjq_D_1 5wjq 169-448 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
4-44PF01352KRAB boxNo overlap with loaded model regions
173-195PF00096Zinc finger, C2H2 typeoverlaps 169-448
202-223PF00096Zinc finger, C2H2 typeoverlaps 169-448
229-251PF00096Zinc finger, C2H2 typeoverlaps 169-448
285-307PF00096Zinc finger, C2H2 typeoverlaps 169-448
313-335PF00096Zinc finger, C2H2 typeoverlaps 169-448
341-363PF00096Zinc finger, C2H2 typeoverlaps 169-448
369-391PF00096Zinc finger, C2H2 typeoverlaps 169-448
425-447PF00096Zinc finger, C2H2 typeoverlaps 169-448
453-473PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions