ModCRE DB

Transcription factor

O95863 - SNAI1

Zinc finger protein SNAI1 (Protein snail homolog 1) (Protein sna)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 264 aa

9 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known9
MotifPredictionSourceDNA bindingSupportLogoActions
MA1558.1 Known JASPAR GGCAGGTGCA Direct PWM Open · Scan
MA1558.2 Known JASPAR GCAGGTG Direct PWM Open · Scan
M04441_2.00 Known CisBP TGCACCTGCC Direct PWM Open · Scan
M04442_2.00 Known CisBP TGCACCTGCC Direct PWM Open · Scan
M04443_2.00 Known CisBP TGCACCTGCT Direct PWM Open · Scan
M04444_2.00 Known CisBP CGCACCTGCT Direct PWM Open · Scan
M08303_2.00 Known CisBP CCCTGCACCTGCTGC Direct PWM Open · Scan
M08886_2.00 Known CisBP CCACCTGG Direct PWM Open · Scan
SNAI1_HUMAN.H11MO.0.C Known HOCOMOCO CCAGGTGG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 264 aa
140-257

Region 140-257 0 PWM

Residues
118 aa
Domains
PF13912 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5V3J
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 140-2571 model
Actions
Predicted = Low TFS_O95863:140:257_5v3j_E_1 5v3j 140-257 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
153-176PF13912C2H2-type zinc fingeroverlaps 140-257
181-202PF00096Zinc finger, C2H2 typeoverlaps 140-257
208-230PF00096Zinc finger, C2H2 typeoverlaps 140-257