ModCRE DB

Transcription factor

O95948 - ONECUT2

One cut domain family member 2 (Hepatocyte nuclear factor 6-beta) (HNF-6-beta) (One cut homeobox 2) (Transcription factor ONECUT-2) (OC-2)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 504 aa

11 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known11
MotifPredictionSourceDNA bindingSupportLogoActions
MA0756.1 Known JASPAR AAAAAATCGATAAT Direct PWM Open · Scan
MA0756.2 Known JASPAR CGATCGATA Direct PWM Open · Scan
MA0756.3 Known JASPAR GATCGATA Direct PWM Open · Scan
M02942_2.00 Known CisBP ATTATCGATTTTTT Direct PWM Open · Scan
M03714_2.00 Known CisBP AATTATCGATCGGT Direct PWM Open · Scan
M04667_2.00 Known CisBP GTATCGATCG Direct PWM Open · Scan
M04668_2.00 Known CisBP TTATTGATTT Direct PWM Open · Scan
M04669_2.00 Known CisBP ACCGATCGATAC Direct PWM Open · Scan
M04670_2.00 Known CisBP TTATCGATTGT Direct PWM Open · Scan
M04671_2.00 Known CisBP ACGGATCAATAA Direct PWM Open · Scan
M04672_2.00 Known CisBP TTATTGATTTT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 504 aa
393-480

Region 393-480 0 PWM

Residues
88 aa
Domains
PF02376 · CUT domain PF00046 · Homeodomain
3D models
1 active PDB
Templates
1HF0
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 393-4801 model
Actions
Predicted = Low DIMER_O95948:393:480_1hf0_B_1 1hf0 393-480 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
331-406PF02376CUT domainoverlaps 393-480
427-480PF00046Homeodomainoverlaps 393-480