ModCRE DB

Transcription factor

P04198 - MYCN

N-myc proto-oncogene protein (Class E basic helix-loop-helix protein 37) (bHLHe37)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 464 aa

7 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known7
MotifPredictionSourceDNA bindingSupportLogoActions
MA0104.4 Known JASPAR GGCCACGTGGCC Direct PWM Open · Scan
MA0104.5 Known JASPAR CCACGTGG Direct PWM Open · Scan
M04128_2.00 Known CisBP ACCACGTGCC Direct PWM Open · Scan
M08053_2.00 Known CisBP GGCCACGTGGCC Direct PWM Open · Scan
M08727_2.00 Known CisBP GCCCACGTGGCC Direct PWM Open · Scan
M09846_2.00 Known CisBP TCCCACGTGTCA Direct PWM Open · Scan
MYCN_HUMAN.H11MO.0.A Known HOCOMOCO GGCCACGTGGGC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 464 aa
377-462

Region 377-462 0 PWM

Residues
86 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
5I50
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 377-4621 model
Actions
Predicted = Low DIMER_P04198:377:462_5i50_A_1 5i50 377-462 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
9-372PF01056Myc amino-terminal regionNo overlap with loaded model regions
382-434PF00010Helix-loop-helix DNA-binding domainoverlaps 377-462