ModCRE DB

Transcription factor

P04637 - TP53

Cellular tumor antigen p53 (Antigen NY-CO-13) (Phosphoprotein p53) (Tumor suppressor p53)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 393 aa

8 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known8
MotifPredictionSourceDNA bindingSupportLogoActions
MA0106.1 Known JASPAR CCGGACATGCCCGGGCATGT Direct PWM Open · Scan
MA0106.2 Known JASPAR ACATGCCCAGACATG Direct PWM Open · Scan
MA0106.3 Known JASPAR AACATGCCCGGGCATGTC Direct PWM Open · Scan
M09337_2.00 Known CisBP AGACATGCCCAGACATGCCC Direct PWM Open · Scan
M09621_2.00 Known CisBP GGGACATGTCTGGACATGTC Direct PWM Open · Scan
M11197_2.00 Known CisBP AGACATGCCCGGGCATGTCC Direct PWM Open · Scan
M11198_2.00 Known CisBP AGACATGCCT Direct PWM Open · Scan
P53_HUMAN.H11MO.0.A Known HOCOMOCO AGACATGCCCAGACATGCCC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 393 aa
50-65

Region 50-65 0 PWM

Residues
16 aa
Domains
PF18521 · Transactivation domain 2
3D models
1 active PDB
Templates
4J19
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 50-651 model
Actions
Predicted = Low DIMER_P04637:50:65_4j19_B_1 4j19 50-65 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
6-30PF08563P53 transactivation motifNo overlap with loaded model regions
35-59PF18521Transactivation domain 2overlaps 50-65
100-288PF00870P53 DNA-binding domainNo overlap with loaded model regions
319-357PF07710P53 tetramerisation motifNo overlap with loaded model regions