ModCRE DB

Transcription factor

P08047 - SP1

Transcription factor Sp1

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 785 aa

14 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known14
MotifPredictionSourceDNA bindingSupportLogoActions
MA0079.1 Known JASPAR GGGGCGGGGT Direct PWM Open · Scan
MA0079.2 Known JASPAR CCCCGCCCCC Direct PWM Open · Scan
MA0079.3 Known JASPAR GCCCCGCCCCC Direct PWM Open · Scan
MA0079.4 Known JASPAR TAAGCCACGCCCACT Direct PWM Open · Scan
MA0079.5 Known JASPAR GGGGCGGGG Direct PWM Open · Scan
M02921_2.00 Known CisBP ACCCCGCCCCC Direct PWM Open · Scan
M04605_2.00 Known CisBP TAAGCCACGCCCACT Direct PWM Open · Scan
M04606_2.00 Known CisBP TAAGCCACGCCCACT Direct PWM Open · Scan
M08096_2.00 Known CisBP GCCCCGCCCCC Direct PWM Open · Scan
M08363_2.00 Known CisBP CCCCGCCCCCGCCCC Direct PWM Open · Scan
M08938_2.00 Known CisBP CCCCCCCCCGGCCCCGCCCCCC Direct PWM Open · Scan
M10294_2.00 Known CisBP ACCCCGCCCC Direct PWM Open · Scan
M10300_2.00 Known CisBP GGCCCCGCCCCCC Direct PWM Open · Scan
SP1_HUMAN.H11MO.0.A Known HOCOMOCO GGGGGGCGGGGCCGGGGGGGGG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 785 aa
624-708

Region 624-708 0 PWM

Residues
85 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
1A1G
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 624-7081 model
Actions
Predicted = Low TFS_P08047:624:708_1a1g_A_1 1a1g 624-708 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
656-680PF00096Zinc finger, C2H2 typeoverlaps 624-708
686-708PF00096Zinc finger, C2H2 typeoverlaps 624-708