ModCRE DB

Transcription factor

P09017 - HOXC4

Homeobox protein Hox-C4 (Homeobox protein CP19) (Homeobox protein Hox-3E)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 264 aa

8 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known8
MotifPredictionSourceDNA bindingSupportLogoActions
MA1504.1 Known JASPAR GTCATTAA Direct PWM Open · Scan
MA1504.2 Known JASPAR TCATTA Direct PWM Open · Scan
M00328_2.00 Known CisBP TTAATTAT Direct PWM Open · Scan
M00329_2.00 Known CisBP TTAATTACC Direct PWM Open · Scan
M00330_2.00 Known CisBP TTAATTAT Direct PWM Open · Scan
M05385_2.00 Known CisBP TTAATGAC Direct PWM Open · Scan
M05386_2.00 Known CisBP CTAATGAC Direct PWM Open · Scan
M05387_2.00 Known CisBP TTAATGAC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 264 aa
133-216

Region 133-216 0 PWM

Residues
84 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
2R5Y
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 133-2161 model
Actions
Predicted = Low DIMER_P09017:133:216_2r5y_A_1 2r5y 133-216 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
157-213PF00046Homeodomainoverlaps 133-216