ModCRE DB

Transcription factor

P09067 - HOXB5

Homeobox protein Hox-B5 (Homeobox protein HHO.C10) (Homeobox protein Hox-2A) (Homeobox protein Hu-1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 269 aa

9 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known9
MotifPredictionSourceDNA bindingSupportLogoActions
MA0904.2 Known JASPAR GTAATTAC Direct PWM Open · Scan
MA0904.3 Known JASPAR TAATTA Direct PWM Open · Scan
M03125_2.00 Known CisBP CTTAATTAGT Direct PWM Open · Scan
M05051_2.00 Known CisBP GTAATTGC Direct PWM Open · Scan
M05052_2.00 Known CisBP CTAATTGC Direct PWM Open · Scan
M05053_2.00 Known CisBP TTAATGAC Direct PWM Open · Scan
M05054_2.00 Known CisBP GTAATTAC Direct PWM Open · Scan
M05055_2.00 Known CisBP GTAATTAC Direct PWM Open · Scan
M05056_2.00 Known CisBP TTAATGAC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 269 aa
174-254

Region 174-254 0 PWM

Residues
81 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
2R5Y
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 174-2541 model
Actions
Predicted = Low DIMER_P09067:174:254_2r5y_A_1 2r5y 174-254 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
195-251PF00046Homeodomainoverlaps 174-254