ModCRE DB

Transcription factor

P09629 - HOXB7

Homeobox protein Hox-B7 (Homeobox protein HHO.C1) (Homeobox protein Hox-2C)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 217 aa

14 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known14
MotifPredictionSourceDNA bindingSupportLogoActions
MA1501.1 Known JASPAR GGTAATTAAC Direct PWM Open · Scan
MA1501.2 Known JASPAR GTAATTA Direct PWM Open · Scan
M00331_2.00 Known CisBP CCCTAAC Direct PWM Open · Scan
M00332_2.00 Known CisBP ATTATATATA Direct PWM Open · Scan
M00333_2.00 Known CisBP ATATATATTT Direct PWM Open · Scan
M00334_2.00 Known CisBP ATAATTG Direct PWM Open · Scan
M05404_2.00 Known CisBP GTAATTAC Direct PWM Open · Scan
M05405_2.00 Known CisBP GTAATTAC Direct PWM Open · Scan
M05406_2.00 Known CisBP TTAACGAC Direct PWM Open · Scan
M05407_2.00 Known CisBP GTTAATTACC Direct PWM Open · Scan
M05408_2.00 Known CisBP GTTAATTACC Direct PWM Open · Scan
M05409_2.00 Known CisBP TTAACGAC Direct PWM Open · Scan
M09166_2.00 Known CisBP CATTAATCAA Direct PWM Open · Scan
HXB7_HUMAN.H11MO.0.C Known HOCOMOCO TTGATTAATG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 217 aa
127-195

Region 127-195 0 PWM

Residues
69 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
1B8I
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 127-1951 model
Actions
Predicted = Low DIMER_P09629:127:195_1b8i_A_1 1b8i 127-195 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
138-194PF00046Homeodomainoverlaps 127-195