ModCRE DB

Transcription factor

P0C7M4 - RHOXF2B

Rhox homeobox family member 2B

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 288 aa

24 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M05133_2.00 NN 70+% CisBP CTAATCCC 99.3% identity Open · Scan
Nearest Neighbor (70% - 40%)23
MotifPredictionSourceDNA bindingSupportLogoActions
M02209_2.00 NN 70-40% CisBP AGCGGATATA 63.6% identity Open · Scan
MA0644.1 NN 70-40% JASPAR ACCAATTAAC 59.0% identity Open · Scan
M02103_2.00 NN 70-40% CisBP AGGTGTAAA 56.3% identity Open · Scan
M06322_2.00 NN 70-40% CisBP TTAATTA 53.7% identity Open · Scan
M03828_2.00 NN 70-40% CisBP GTTAATTAACGTTAATTAAC 52.8% identity Open · Scan
M00440_2.00 NN 70-40% CisBP TTAATCCC 51.8% identity Open · Scan
M04929_2.00 NN 70-40% CisBP CTAATCCG 51.8% identity Open · Scan
M10741_2.00 NN 70-40% CisBP AACTAATTACCATTATCG 51.8% identity Open · Scan
MA0682.1 NN 70-40% JASPAR TTAATCCC 51.8% identity Open · Scan
MA0682.2 NN 70-40% JASPAR CTAATCCC 51.8% identity Open · Scan
MA0854.1 NN 70-40% JASPAR CGAATTAATTAATCACC 51.8% identity Open · Scan
MA1547.1 NN 70-40% JASPAR ATAATCCC 51.8% identity Open · Scan
M03076_2.00 NN 70-40% CisBP TTAATTAAATTAA 50.9% identity Open · Scan
MA0874.1 NN 70-40% JASPAR GTCCATTAATTAATGGA 50.9% identity Open · Scan
M03236_2.00 NN 70-40% CisBP GTTAATCCGC 50.8% identity Open · Scan
M03855_2.00 NN 70-40% CisBP TAATTAGATTA 50.8% identity Open · Scan
MA0883.1 NN 70-40% JASPAR TGAACCGGATTAATGAA 50.8% identity Open · Scan
M03121_2.00 NN 70-40% CisBP TTAATTGG 50.7% identity Open · Scan
MA0716.1 NN 70-40% JASPAR CTAATTAA 50.7% identity Open · Scan
M00428_2.00 NN 70-40% CisBP TTAATCCC 50.0% identity Open · Scan
M02225_2.00 NN 70-40% CisBP TGTAATTT 50.0% identity Open · Scan
M03903_2.00 NN 70-40% CisBP ATAATTGATTAT 50.0% identity Open · Scan
MA0714.1 NN 70-40% JASPAR CTTAATCCC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 288 aa
140-191

Region 140-191 0 PWM

Residues
52 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
1JGG
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 140-1911 model
Actions
Predicted = Low DIMER_P0C7M4:140:191_1jgg_B_1 1jgg 140-191 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
140-191PF00046Homeodomainoverlaps 140-191