ModCRE DB

Transcription factor

P0CB48 - UBTFL6

Putative upstream-binding factor 1-like protein 6

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 400 aa

8 Generated PWM 10 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE8
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_sp_P0CB48_UBFL6_HUMAN:107:177_3tmm_A_1 ModCRE Homology model CTGCCGCCCCTACCGAC Region 107-177 · 1 3D model Open · Scan
TFS_sp_P0CB48_UBFL6_HUMAN:107:177_6erq_C_1 ModCRE Homology model CAAACCCGTCCCCAAAG Region 107-177 · 1 3D model Open · Scan
TFS_sp_P0CB48_UBFL6_HUMAN:107:177_6hc3_A_1 ModCRE Homology model TAACTAAAGTCG Region 107-177 · 1 3D model Open · Scan
TFS_sp_P0CB48_UBFL6_HUMAN:230:313_3tmm_A_1 ModCRE Homology model GGGGGCCAAAATAGTCACAAACAGGT Region 230-313 · 1 3D model Open · Scan
TFS_sp_P0CB48_UBFL6_HUMAN:230:313_3tq6_A_1 ModCRE Homology model TAAGTGTCGGTTGGGGCCCCCC Region 230-313 · 1 3D model Open · Scan
TFS_sp_P0CB48_UBFL6_HUMAN:230:313_4nnu_A_1 ModCRE Homology model AGGTAAGGCGCACGATTTTTAAAAAAAAAAAAAAAAAAAAAAA Region 230-313 · 1 3D model Open · Scan
TFS_sp_P0CB48_UBFL6_HUMAN:230:313_4nnu_B_1 ModCRE Homology model GGGGGGCTTGTAACGTGGGGAACTTCGC Region 230-313 · 1 3D model Open · Scan
TFS_sp_P0CB48_UBFL6_HUMAN:230:313_4nod_A_1 ModCRE Homology model GGGATGTTGGCCCGTTGTGCCC Region 230-313 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 400 aa
107-177
230-313

Region 107-177 3 PWM

Residues
71 aa
Domains
PF00505 · HMG (high mobility group) box
3D models
5 active PDBs · 5 summary rows
Templates
3TMM, 4NNU, 6ERQ, 6HC3, 7LBX
Sources
Predicted = Low
Scan this region Show models

Region 230-313 5 PWM

Residues
84 aa
Domains
No overlapping PFAM annotation recorded
3D models
5 active PDBs
Templates
3TMM, 3TQ6, 4NNU, 4NOD
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
10 active PDB models 5 summary rows
Region 107-1775 models · 5 summary rows
Actions
Predicted = Low TFS_sp_P0CB48_UBFL6_HUMAN:107:177_3tmm_A_1 3tmm 107-177 View model · PDB
Predicted = Low TFS_sp_P0CB48_UBFL6_HUMAN:107:177_4nnu_B_1 4nnu 107-177 View model · PDB
Predicted = Low TFS_sp_P0CB48_UBFL6_HUMAN:107:177_6erq_C_1 6erq 107-177 View model · PDB
Predicted = Low TFS_sp_P0CB48_UBFL6_HUMAN:107:177_6hc3_A_1 6hc3 107-177 View model · PDB
Predicted = Low TFS_sp_P0CB48_UBFL6_HUMAN:107:177_7lbx_B_1 7lbx 107-177 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 6hc3 96:182 107 177 P:A · DNA:B,C 29.6% / 67.6% 36 View · PDB TFS_sp_P0CB48_UBFL6_HUMAN:107:177_6hc3_A_1
2 7lbx 96:182 107 177 P:B · DNA:C,D,E,F 29.6% / 67.6% 37 View · PDB TFS_sp_P0CB48_UBFL6_HUMAN:107:177_7lbx_B_1
3 4nnu 96:182 107 177 P:B · DNA:C,D,E,F 29.6% / 67.6% 36 View · PDB TFS_sp_P0CB48_UBFL6_HUMAN:107:177_4nnu_B_1
4 3tmm 96:182 107 177 P:A · DNA:B,C 29.6% / 67.6% 36 View · PDB TFS_sp_P0CB48_UBFL6_HUMAN:107:177_3tmm_A_1
5 6erq 96:182 107 177 P:C · DNA:D,E 29.6% / 67.6% 36 View · PDB TFS_sp_P0CB48_UBFL6_HUMAN:107:177_6erq_C_1
Region 230-3135 models
Actions
Predicted = Low TFS_sp_P0CB48_UBFL6_HUMAN:230:313_3tmm_A_1 3tmm 230-313 View model · PDB
Predicted = Low TFS_sp_P0CB48_UBFL6_HUMAN:230:313_3tq6_A_1 3tq6 230-313 View model · PDB
Predicted = Low TFS_sp_P0CB48_UBFL6_HUMAN:230:313_4nnu_A_1 4nnu 230-313 View model · PDB
Predicted = Low TFS_sp_P0CB48_UBFL6_HUMAN:230:313_4nnu_B_1 4nnu 230-313 View model · PDB
Predicted = Low TFS_sp_P0CB48_UBFL6_HUMAN:230:313_4nod_A_1 4nod 230-313 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
107-174PF00505HMG (high mobility group) boxoverlaps 107-177