Transcription factor

P0CG24 - ZNF883

Zinc finger protein 883

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 379 aa

122 Generated PWM 11 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)113

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
M04653_2.00	NN 70-40%	CisBP	GGTACGGTTGTCCATGTTGCAA	66.6% identity		Open · Scan
M00953_2.00	NN 70-40%	CisBP	ATCTATAT	65.8% identity		Open · Scan
M00943_2.00	NN 70-40%	CisBP	CCCGCTGC	64.7% identity		Open · Scan
M08985_2.00	NN 70-40%	CisBP	TGAGGACCTACTGTGTGCC	64.3% identity		Open · Scan
M00950_2.00	NN 70-40%	CisBP	GCAGCCCA	64.2% identity		Open · Scan
M00944_2.00	NN 70-40%	CisBP	TCGCTATAA	63.4% identity		Open · Scan
M00958_2.00	NN 70-40%	CisBP	CGGCATCCC	63.0% identity		Open · Scan
M04613_2.00	NN 70-40%	CisBP	CTCATGTGCTAATTACAAA	62.3% identity		Open · Scan
M00939_2.00	NN 70-40%	CisBP	CCACCTCA	62.1% identity		Open · Scan
M00948_2.00	NN 70-40%	CisBP	GCAGCACC	61.9% identity		Open · Scan
M00959_2.00	NN 70-40%	CisBP	GCCCTCCC	61.9% identity		Open · Scan
M00960_2.00	NN 70-40%	CisBP	TGCATCCC	61.9% identity		Open · Scan
M07590_2.00	NN 70-40%	CisBP	TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT	61.5% identity		Open · Scan
MA1124.1	NN 70-40%	JASPAR	CATTCATTCATTC	61.4% identity		Open · Scan
M07700_2.00	NN 70-40%	CisBP	ATGTTGTGAGGAAGCCCA	60.3% identity		Open · Scan
M08325_2.00	NN 70-40%	CisBP	TTTTTTTTT	59.8% identity		Open · Scan
M00955_2.00	NN 70-40%	CisBP	ACGTCCTCT	59.5% identity		Open · Scan
M07635_2.00	NN 70-40%	CisBP	AAGTTTTCTTGTATTATATCT	59.5% identity		Open · Scan
M07689_2.00	NN 70-40%	CisBP	ACCCAGGCTCCTTCCATCTTGTGGCTC	59.2% identity		Open · Scan
M08375_2.00	NN 70-40%	CisBP	TTCCCCATTGGCTACTGCACCGGTCCT	59.1% identity		Open · Scan
M08392_2.00	NN 70-40%	CisBP	CTTCACCTGCTGAGG	58.8% identity		Open · Scan
MA1587.1	NN 70-40%	JASPAR	CCTCGACCTCCTGA	58.8% identity		Open · Scan
M04611_2.00	NN 70-40%	CisBP	CTTTCGGACAC	58.6% identity		Open · Scan
M02924_2.00	NN 70-40%	CisBP	AGTGTTAACAGAACACCT	58.4% identity		Open · Scan
M04650_2.00	NN 70-40%	CisBP	GCATAACTGCCCCGCTGCC	58.3% identity		Open · Scan
M08267_2.00	NN 70-40%	CisBP	CAGTTTCATTTTCC	58.2% identity		Open · Scan
M04387_2.00	NN 70-40%	CisBP	CGTGCTCCCC	58.1% identity		Open · Scan
M08944_2.00	NN 70-40%	CisBP	TACCATGCTGTTTTGATTAC	58.0% identity		Open · Scan
M00782_2.00	NN 70-40%	CisBP	AGTGTGCGCTA	57.7% identity		Open · Scan
M08309_2.00	NN 70-40%	CisBP	AAAAACCCCCCTGCAGAGCCCAGCCCT	57.7% identity		Open · Scan
M08355_2.00	NN 70-40%	CisBP	GCGAACTCCTATTCATCC	57.7% identity		Open · Scan
M04621_2.00	NN 70-40%	CisBP	AGCAATTCCGCTCA	57.6% identity		Open · Scan
M08279_2.00	NN 70-40%	CisBP	CCTCCCTCC	57.6% identity		Open · Scan
MA1589.1	NN 70-40%	JASPAR	TAGGAGTGGAATTGCTGGGTC	57.6% identity		Open · Scan
M08329_2.00	NN 70-40%	CisBP	GCTGCATAGTATTCC	57.1% identity		Open · Scan
M07753_2.00	NN 70-40%	CisBP	TGCATTCCTTGGCTTGTG	56.9% identity		Open · Scan
M07658_2.00	NN 70-40%	CisBP	CCGCCGCAGCCGCCG	56.8% identity		Open · Scan
M08860_2.00	NN 70-40%	CisBP	TCTTATAAGGGCACTAATCCCATT	56.6% identity		Open · Scan
M08334_2.00	NN 70-40%	CisBP	TTTGTTTTTTTCTGATTGCTTTTTACTTAT	56.0% identity		Open · Scan
M07605_2.00	NN 70-40%	CisBP	TATTTTTTTTTATTTTTTTTTTTTTTTTTT	55.9% identity		Open · Scan
M08540_2.00	NN 70-40%	CisBP	CCCCT	55.8% identity		Open · Scan
M04465_2.00	NN 70-40%	CisBP	GTGATTCTTATCTTATCCTT	55.7% identity		Open · Scan
M08252_2.00	NN 70-40%	CisBP	CCGGCTCCAGCACCC	55.5% identity		Open · Scan
M08245_2.00	NN 70-40%	CisBP	TGGTGCCTTATTCCC	55.4% identity		Open · Scan
M08347_2.00	NN 70-40%	CisBP	GCCCTGGGCAGC	55.4% identity		Open · Scan
M05853_2.00	NN 70-40%	CisBP	CCACCTTTAGCCATATCT	55.3% identity		Open · Scan
M07712_2.00	NN 70-40%	CisBP	ACATTTTTTTAATCTAAAAAAACATTTACA	54.8% identity		Open · Scan
M08311_2.00	NN 70-40%	CisBP	CTGGAACAGAAGGGGCGA	54.8% identity		Open · Scan
M08934_2.00	NN 70-40%	CisBP	GCTGTACCTGCTTATTAGGC	54.7% identity		Open · Scan
M07699_2.00	NN 70-40%	CisBP	GGTTTAT	54.5% identity		Open · Scan
M08254_2.00	NN 70-40%	CisBP	CTGCCCTGGGACTTT	54.5% identity		Open · Scan
M07707_2.00	NN 70-40%	CisBP	TCCCGC	54.4% identity		Open · Scan
M07729_2.00	NN 70-40%	CisBP	CCAGACTGCCTGCCAAAACCCCCT	54.3% identity		Open · Scan
M04536_2.00	NN 70-40%	CisBP	ACGTAACCCGATACC	54.2% identity		Open · Scan
M07579_2.00	NN 70-40%	CisBP	CATCTCCAGGA	54.2% identity		Open · Scan
M07593_2.00	NN 70-40%	CisBP	AGATGAAGTCACCCCTCTTAC	54.2% identity		Open · Scan
M07582_2.00	NN 70-40%	CisBP	TCCCTG	54.0% identity		Open · Scan
M07610_2.00	NN 70-40%	CisBP	CCTTCTTCCTCCCCCCTGCCCACC	54.0% identity		Open · Scan
MA1597.1	NN 70-40%	JASPAR	CCCAGGGAAGCCATTTC	53.9% identity		Open · Scan
M06179_2.00	NN 70-40%	CisBP	TAAGCCTATAGA	53.7% identity		Open · Scan
M07620_2.00	NN 70-40%	CisBP	TTGGATCTGTGGATTCATGTCTTTCAT	53.7% identity		Open · Scan
M07649_2.00	NN 70-40%	CisBP	CCCCCCCCCCCCTCAGGAATGCC	53.7% identity		Open · Scan
M04505_2.00	NN 70-40%	CisBP	AGCTTTTCCCACAC	53.6% identity		Open · Scan
M07648_2.00	NN 70-40%	CisBP	GCTTGCAAAAAAAATTTAACTCCCAGCTC	53.6% identity		Open · Scan
M00952_2.00	NN 70-40%	CisBP	GGATGCTC	53.5% identity		Open · Scan
M01442_2.00	NN 70-40%	CisBP	ACCCCACATT	53.5% identity		Open · Scan
M08901_2.00	NN 70-40%	CisBP	CCAGTTCACACC	53.5% identity		Open · Scan
M00945_2.00	NN 70-40%	CisBP	CACCGCAC	53.4% identity		Open · Scan
M07587_2.00	NN 70-40%	CisBP	CCCCCTCCCCAGTCGAGCCCCCGC	53.4% identity		Open · Scan
M07562_2.00	NN 70-40%	CisBP	GAAAAAAAC	53.3% identity		Open · Scan
M07581_2.00	NN 70-40%	CisBP	TCCCCTGTGCTTCTCTCCCCT	53.2% identity		Open · Scan
M07693_2.00	NN 70-40%	CisBP	CTCCTGTGTGTGCCTTGGCTG	52.9% identity		Open · Scan
M05859_2.00	NN 70-40%	CisBP	GGCCACGCCCACT	52.6% identity		Open · Scan
M08300_2.00	NN 70-40%	CisBP	CTGCCCAATTCAT	52.6% identity		Open · Scan
MA0685.1	NN 70-40%	JASPAR	TAAGCCACGCCCCCTTT	52.6% identity		Open · Scan
MA1600.1	NN 70-40%	JASPAR	ATACAGTCCACCCCTTTA	52.6% identity		Open · Scan
M07588_2.00	NN 70-40%	CisBP	TCCTTCCCTCTTTCC	52.5% identity		Open · Scan
M08256_2.00	NN 70-40%	CisBP	GTGCCTT	52.5% identity		Open · Scan
M07667_2.00	NN 70-40%	CisBP	CCGCACAGGCCCCCGGGCCCC	52.4% identity		Open · Scan
M01456_2.00	NN 70-40%	CisBP	GTGATCGGCG	52.1% identity		Open · Scan
M07646_2.00	NN 70-40%	CisBP	CTTTTTTTT	51.9% identity		Open · Scan
M07684_2.00	NN 70-40%	CisBP	CCTGTTCTTGACTTT	51.9% identity		Open · Scan
M08371_2.00	NN 70-40%	CisBP	CCAGACTTGTCCTCT	51.9% identity		Open · Scan
MA0747.1	NN 70-40%	JASPAR	GCCACGCCCACT	51.9% identity		Open · Scan
M08335_2.00	NN 70-40%	CisBP	AGTCGTTGTCTG	51.8% identity		Open · Scan
M07683_2.00	NN 70-40%	CisBP	GTGGGAAAGCCT	51.7% identity		Open · Scan
MA0750.1	NN 70-40%	JASPAR	GGCGACCACCGA	51.7% identity		Open · Scan
MA1601.1	NN 70-40%	JASPAR	ATGTGGGAAA	51.7% identity		Open · Scan
M03671_2.00	NN 70-40%	CisBP	ATTACCATACAAGTGCAC	51.6% identity		Open · Scan
MA1602.1	NN 70-40%	JASPAR	CGTCTACACGGG	51.6% identity		Open · Scan
M08395_2.00	NN 70-40%	CisBP	GCTGCCTACTCTTCC	51.5% identity		Open · Scan
M08373_2.00	NN 70-40%	CisBP	CCCCCTGGCTCTTCCTCT	51.3% identity		Open · Scan
M08917_2.00	NN 70-40%	CisBP	GCTGAGCCATGTGGGGTGCT	51.3% identity		Open · Scan
MA1564.1	NN 70-40%	JASPAR	GCCACGCCCCCC	51.3% identity		Open · Scan
M00609_2.00	NN 70-40%	CisBP	GGAAGCCCTA	51.2% identity		Open · Scan
MA1588.1	NN 70-40%	JASPAR	GAATTCTTGGTTGAC	51.2% identity		Open · Scan
M07578_2.00	NN 70-40%	CisBP	CAACTCTCC	50.9% identity		Open · Scan
M07714_2.00	NN 70-40%	CisBP	AGCCCATTGGGGCCTATGCCC	50.9% identity		Open · Scan
M07686_2.00	NN 70-40%	CisBP	TAGCTTGTTTCCAGCCAC	50.8% identity		Open · Scan
M08292_2.00	NN 70-40%	CisBP	TGTATTCCTTGTCATGTGTGG	50.6% identity		Open · Scan
M08366_2.00	NN 70-40%	CisBP	GTTTGCTGCTTACAA	50.6% identity		Open · Scan
M07746_2.00	NN 70-40%	CisBP	CAGCTGGCGCCCAACATGGGTCCC	50.5% identity		Open · Scan
M08291_2.00	NN 70-40%	CisBP	AATCCAGCCCTAGACTCTCCC	50.5% identity		Open · Scan
M02896_2.00	NN 70-40%	CisBP	TGCTTTCTAGGAATTCA	50.3% identity		Open · Scan
MA0731.1	NN 70-40%	JASPAR	TGCTTTCTAGGAATTCA	50.3% identity		Open · Scan
M07725_2.00	NN 70-40%	CisBP	AAGCACTGTACT	50.2% identity		Open · Scan
M07761_2.00	NN 70-40%	CisBP	CTGATTATTCACCCA	50.2% identity		Open · Scan
M08255_2.00	NN 70-40%	CisBP	CTCTTCCGGT	50.2% identity		Open · Scan
M07607_2.00	NN 70-40%	CisBP	GGCTCCACG	50.1% identity		Open · Scan
M07740_2.00	NN 70-40%	CisBP	TCCTGATTCCACACTCAAACATAACTTT	50.1% identity		Open · Scan
M01042_2.00	NN 70-40%	CisBP	TGGGACCTGA	50.0% identity		Open · Scan
M10391_2.00	NN 70-40%	CisBP	TACCCCACATTTATTTA	50.0% identity		Open · Scan
MA1515.1	NN 70-40%	JASPAR	CACCACGCCCA	50.0% identity		Open · Scan

ModCRE9

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
TFS_sp_P0CG24_ZN883_HUMAN:12:288_5v3j_E_1	ModCRE	Homology model	CACGGGGGGGCCCCCCCCCCCCCCCC	Region 12-288 · 1 3D model		Open · Scan
TFS_sp_P0CG24_ZN883_HUMAN:12:288_5v3m_C_1	ModCRE	Homology model	GGGGGGGGGCGGGGGGGGCGGGGACC	Region 12-288 · 1 3D model		Open · Scan
TFS_sp_P0CG24_ZN883_HUMAN:12:288_5wjq_D_1	ModCRE	Homology model	GGGGGGGGGGGGAAGCGCGGGGGGGGCG	Region 12-288 · 1 3D model		Open · Scan
TFS_sp_P0CG24_ZN883_HUMAN:28:175_2i13_A_1	ModCRE	Homology model	ACTCAGTAGTAGGAGTAGTTT	Region 28-175 · 1 3D model		Open · Scan
TFS_sp_P0CG24_ZN883_HUMAN:291:373_1a1h_A_1	ModCRE	Homology model	GAGGGTCCCG	Region 291-373 · 1 3D model		Open · Scan
TFS_sp_P0CG24_ZN883_HUMAN:291:373_1a1i_A_1	ModCRE	Homology model	GAGGGACCCC	Region 291-373 · 1 3D model		Open · Scan
TFS_sp_P0CG24_ZN883_HUMAN:291:373_1a1k_A_1	ModCRE	Homology model	GCGCCCCCCG	Region 291-373 · 1 3D model		Open · Scan
TFS_sp_P0CG24_ZN883_HUMAN:291:373_1jk1_A_1	ModCRE	Homology model	GAGGGTCACT	Region 291-373 · 1 3D model		Open · Scan
TFS_sp_P0CG24_ZN883_HUMAN:291:373_1jk2_A_1	ModCRE	Homology model	GAAGGACCCC	Region 291-373 · 1 3D model		Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 379 aa

12-373

Region 12-373 9 PWM

Residues

362 aa

Domains

PF13912 · C2H2-type zinc finger PF13465 · Zinc-finger double domain PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type

3D models

11 active PDBs · 6 summary rows

Templates

1A1H, 1A1I, 1A1K, 1JK1, 1JK2, 1LLM, 2I13, 5V3J, ...

Sources

Predicted = Low

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

11 active PDB models 6 summary rows

Region 12-37311 models · 6 summary rows

Source ↕	Model ↕	Template ↕	Residues modeled ↕	Actions
Predicted = Low	DIMER_sp_P0CG24_ZN883_HUMAN:235:286_1llm_D_1	1llm	235-286	View model · PDB
Predicted = Low	TFS_sp_P0CG24_ZN883_HUMAN:12:288_5v3j_E_1	5v3j	12-288	View model · PDB
Predicted = Low	TFS_sp_P0CG24_ZN883_HUMAN:12:288_5v3m_C_1	5v3m	12-288	View model · PDB
Predicted = Low	TFS_sp_P0CG24_ZN883_HUMAN:12:288_5wjq_D_1	5wjq	12-288	View model · PDB
Predicted = Low	TFS_sp_P0CG24_ZN883_HUMAN:13:311_7w1m_H_1	7w1m	13-311	View model · PDB
Predicted = Low	TFS_sp_P0CG24_ZN883_HUMAN:28:175_2i13_A_1	2i13	28-175	View model · PDB
Predicted = Low	TFS_sp_P0CG24_ZN883_HUMAN:291:373_1a1h_A_1	1a1h	291-373	View model · PDB
Predicted = Low	TFS_sp_P0CG24_ZN883_HUMAN:291:373_1a1i_A_1	1a1i	291-373	View model · PDB
Predicted = Low	TFS_sp_P0CG24_ZN883_HUMAN:291:373_1a1k_A_1	1a1k	291-373	View model · PDB
Predicted = Low	TFS_sp_P0CG24_ZN883_HUMAN:291:373_1jk1_A_1	1jk1	291-373	View model · PDB
Predicted = Low	TFS_sp_P0CG24_ZN883_HUMAN:291:373_1jk2_A_1	1jk2	291-373	View model · PDB

Model-summary evidence imported for this region.

Rank	Template	Domain	N-tails	C-tails	Chains	Identity / similarity	Coverage	Model file
4	2i13	12:344	28	175	P:A · DNA:C,D	60.8% / 70.9%	96	View · PDB TFS_sp_P0CG24_ZN883_HUMAN:28:175_2i13_A_1
3	5wjq	12:344	12	288	P:D · DNA:A,B	52.0% / 67.1%	98	View · PDB TFS_sp_P0CG24_ZN883_HUMAN:12:288_5wjq_D_1
1	1llm	12:344	235,235	286,286	P:C,D · DNA:A,B	51.9% / 65.4%	59,61	View · PDB DIMER_sp_P0CG24_ZN883_HUMAN:235:286_1llm_D_1
1	5v3m	12:344	12	288	P:C · DNA:A,B	50.5% / 70.0%	100	View · PDB TFS_sp_P0CG24_ZN883_HUMAN:12:288_5v3m_C_1
2	5v3j	12:344	12	288	P:E · DNA:A,B	50.5% / 70.0%	100	View · PDB TFS_sp_P0CG24_ZN883_HUMAN:12:288_5v3j_E_1
5	7w1m	12:344	13	311	P:H · DNA:F,G	35.1% / 52.3%	92	View · PDB TFS_sp_P0CG24_ZN883_HUMAN:13:311_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
13-35	PF13912	C2H2-type zinc finger	overlaps 12-373
55-80	PF13465	Zinc-finger double domain	overlaps 12-373
111-136	PF13465	Zinc-finger double domain	overlaps 12-373
153-175	PF00096	Zinc finger, C2H2 type	overlaps 12-373
196-220	PF13465	Zinc-finger double domain	overlaps 12-373
237-259	PF00096	Zinc finger, C2H2 type	overlaps 12-373
265-287	PF00096	Zinc finger, C2H2 type	overlaps 12-373
308-331	PF13465	Zinc-finger double domain	overlaps 12-373
349-371	PF00096	Zinc finger, C2H2 type	overlaps 12-373