ModCRE DB

Transcription factor

P10073 - ZSCAN22

Zinc finger and SCAN domain-containing protein 22 (Krueppel-related zinc finger protein 2) (Protein HKR2) (Zinc finger protein 50)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 491 aa

4 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known4
MotifPredictionSourceDNA bindingSupportLogoActions
M08935_2.00 Known CisBP CCTCCTCCCTCAGACC Direct PWM Open · Scan
M08261_2.00 Known CisBP CCTCCTCCCTCAGAC Direct PWM Open · Scan
M08361_2.00 Known CisBP CCGCCTCCGCCCTCGGAC Direct PWM Open · Scan
ZSC22_HUMAN.H11MO.0.C Known HOCOMOCO GGTCTGAGGGAGGAGG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 491 aa
262-486

Region 262-486 0 PWM

Residues
225 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5V3J
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 262-4861 model
Actions
Predicted = Low TFS_P10073:262:486_5v3j_E_1 5v3j 262-486 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
45-132PF02023SCAN domainNo overlap with loaded model regions
269-290PF00096Zinc finger, C2H2 typeoverlaps 262-486
296-318PF00096Zinc finger, C2H2 typeoverlaps 262-486
324-346PF00096Zinc finger, C2H2 typeoverlaps 262-486
352-374PF00096Zinc finger, C2H2 typeoverlaps 262-486
380-402PF00096Zinc finger, C2H2 typeoverlaps 262-486
408-430PF00096Zinc finger, C2H2 typeoverlaps 262-486
436-458PF00096Zinc finger, C2H2 typeoverlaps 262-486
464-486PF00096Zinc finger, C2H2 typeoverlaps 262-486