ModCRE DB

Transcription factor

P10242 - MYB

Transcriptional activator Myb (Proto-oncogene c-Myb)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 640 aa

7 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known7
MotifPredictionSourceDNA bindingSupportLogoActions
MA0100.3 Known JASPAR ACCAACTGTC Direct PWM Open · Scan
MA0100.4 Known JASPAR CAACTG Direct PWM Open · Scan
M08150_2.00 Known CisBP ACCAACTGTC Direct PWM Open · Scan
M09260_2.00 Known CisBP CCAACTGCCACC Direct PWM Open · Scan
M11050_2.00 Known CisBP CCCCCAACCGCCATTGGG Direct PWM Open · Scan
M11054_2.00 Known CisBP CTCAACTGGC Direct PWM Open · Scan
MYB_HUMAN.H11MO.0.A Known HOCOMOCO GGTGGCAGTTGG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 640 aa
39-190

Region 39-190 0 PWM

Residues
152 aa
Domains
PF00249 · Myb-like DNA-binding domain PF00249 · Myb-like DNA-binding domain PF00249 · Myb-like DNA-binding domain
3D models
1 active PDB
Templates
1H88
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 39-1901 model
Actions
Predicted = Low TFS_P10242:39:190_1h88_C_1 1h88 39-190 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
40-86PF00249Myb-like DNA-binding domainoverlaps 39-190
92-138PF00249Myb-like DNA-binding domainoverlaps 39-190
144-187PF00249Myb-like DNA-binding domainoverlaps 39-190
268-313PF07988LMSTEN motifNo overlap with loaded model regions
398-556PF09316C-myb, C-terminalNo overlap with loaded model regions