ModCRE DB

Transcription factor

P10588 - NR2F6

Nuclear receptor subfamily 2 group F member 6 (V-erbA-related protein 2) (EAR-2)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 404 aa

13 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known13
MotifPredictionSourceDNA bindingSupportLogoActions
MA1539.1 Known JASPAR AAGGTCACTGACCTT Direct PWM Open · Scan
M02396_2.00 Known CisBP AGGGGTCA Direct PWM Open · Scan
M03386_2.00 Known CisBP GAGGTCAAAAGGTCA Direct PWM Open · Scan
M03387_2.00 Known CisBP GAGGTCAAAGGTCA Direct PWM Open · Scan
M03388_2.00 Known CisBP GAGGTCAAAGGTCA Direct PWM Open · Scan
M05641_2.00 Known CisBP AAGGTCAAAGGTCAA Direct PWM Open · Scan
M05642_2.00 Known CisBP AAGGTCAGTGACCTT Direct PWM Open · Scan
M05643_2.00 Known CisBP GAGGTCAAAGGTCAT Direct PWM Open · Scan
M05644_2.00 Known CisBP AAGGTCACTGACCTT Direct PWM Open · Scan
M05645_2.00 Known CisBP GGGGTCAAAGGTCAG Direct PWM Open · Scan
M05646_2.00 Known CisBP AAGGTCACTGACCTC Direct PWM Open · Scan
M05647_2.00 Known CisBP GGGGTCAAAGGTCAG Direct PWM Open · Scan
M05648_2.00 Known CisBP AAGGTCACCGACCTT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 404 aa
56-127

Region 56-127 0 PWM

Residues
72 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
1 active PDB
Templates
1YNW
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 56-1271 model
Actions
Predicted = Low DIMER_P10588:56:127_1ynw_B_1 1ynw 56-127 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
55-123PF00105Double treble clef zinc finger, C4 typeoverlaps 56-127
197-376PF00104Ligand-binding domain of nuclear hormone receptorNo overlap with loaded model regions