ModCRE DB

Transcription factor

P10827 - THRA

Thyroid hormone receptor alpha (Nuclear receptor subfamily 1 group A member 1) (V-erbA-related protein 7) (EAR-7) (c-erbA-1) (c-erbA-alpha)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 490 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known5
MotifPredictionSourceDNA bindingSupportLogoActions
M09275_2.00 Known CisBP GGGTCACTTCAGGTCAG Direct PWM Open · Scan
MA1969.1 Known JASPAR CCTGTGTCCTCATGTGACCTCTCC Direct PWM Open · Scan
MA1969.2 Known JASPAR GTGTCCTCATGTGACCTC Direct PWM Open · Scan
M03368_2.00 Known CisBP GTGACCTCATAAGGTCAC Direct PWM Open · Scan
THA_HUMAN.H11MO.0.C Known HOCOMOCO GGGTCACTTCAGGTCAG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 490 aa
51-149

Region 51-149 0 PWM

Residues
99 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
1 active PDB
Templates
3M9E
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 51-1491 model
Actions
Predicted = Low DIMER_P10827:51:149_3m9e_B_1 3m9e 51-149 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
52-121PF00105Double treble clef zinc finger, C4 typeoverlaps 51-149
215-376PF00104Ligand-binding domain of nuclear hormone receptorNo overlap with loaded model regions