ModCRE DB

Transcription factor

P10828 - THRB

Thyroid hormone receptor beta (Nuclear receptor subfamily 1 group A member 2) (c-erbA-2) (c-erbA-beta)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 461 aa

19 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known19
MotifPredictionSourceDNA bindingSupportLogoActions
MA1574.1 Known JASPAR GGGGTCAAAGGTCAT Direct PWM Open · Scan
MA1574.2 Known JASPAR GGGTCAAAGGTCA Direct PWM Open · Scan
MA1575.1 Known JASPAR GTGACCTCATTGAGGTCAC Direct PWM Open · Scan
MA1575.2 Known JASPAR TGACCTCATTGAGGTCA Direct PWM Open · Scan
MA1576.1 Known JASPAR GTGACCTTACGTGACCTTA Direct PWM Open · Scan
MA1576.2 Known JASPAR TGACCTTACGTGACCTTA Direct PWM Open · Scan
M03379_2.00 Known CisBP GTGACCTTATAAGGTCAC Direct PWM Open · Scan
M03380_2.00 Known CisBP GTGACCTTATTAAGGTCAC Direct PWM Open · Scan
M03381_2.00 Known CisBP GTGACCTTATGTAAGGTCAC Direct PWM Open · Scan
M05629_2.00 Known CisBP GGGGTCAAAGGTCAT Direct PWM Open · Scan
M05630_2.00 Known CisBP AGAGGTCATGACCTCT Direct PWM Open · Scan
M05631_2.00 Known CisBP GGGGTCAAAGGTCAG Direct PWM Open · Scan
M05632_2.00 Known CisBP AAAGGTCACGACCTCT Direct PWM Open · Scan
M05633_2.00 Known CisBP GTGACCTCAATGAGGTCAC Direct PWM Open · Scan
M05634_2.00 Known CisBP TAAGGTCACGTAAGGTCAC Direct PWM Open · Scan
M05635_2.00 Known CisBP GTGACCTCAATGAGGTCAC Direct PWM Open · Scan
M05636_2.00 Known CisBP TGAGGTCACGTGAGGTCAC Direct PWM Open · Scan
M09285_2.00 Known CisBP GAGGTCAGGTCAGGTCA Direct PWM Open · Scan
THB_HUMAN.H11MO.0.C Known HOCOMOCO GAGGTCAGGTCAGGTCA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 461 aa
103-189

Region 103-189 0 PWM

Residues
87 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
1 active PDB
Templates
2HAN
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 103-1891 model
Actions
Predicted = Low DIMER_P10828:103:189_2han_B_1 2han 103-189 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
106-175PF00105Double treble clef zinc finger, C4 typeoverlaps 103-189
269-435PF00104Ligand-binding domain of nuclear hormone receptorNo overlap with loaded model regions