ModCRE DB

Transcription factor

P11831 - SRF

Serum response factor (SRF)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 508 aa

16 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known16
MotifPredictionSourceDNA bindingSupportLogoActions
MA0083.1 Known JASPAR GCCCATATATGG Direct PWM Open · Scan
MA0083.2 Known JASPAR CATGCCCAAATAAGGCAA Direct PWM Open · Scan
MA0083.3 Known JASPAR TGACCATATATGGTCA Direct PWM Open · Scan
M03341_2.00 Known CisBP GCCATATATGGT Direct PWM Open · Scan
M03342_2.00 Known CisBP TGACCATATATGGTCA Direct PWM Open · Scan
M05553_2.00 Known CisBP CCATACATGG Direct PWM Open · Scan
M05554_2.00 Known CisBP CCATACATGG Direct PWM Open · Scan
M07981_2.00 Known CisBP CCATGGCCAAATAAGGCAA Direct PWM Open · Scan
M07982_2.00 Known CisBP CCATATAAGGCAAA Direct PWM Open · Scan
M07983_2.00 Known CisBP CATGCCCATATAAGGCAA Direct PWM Open · Scan
M07984_2.00 Known CisBP GACCATATAAGGCAACT Direct PWM Open · Scan
M09249_2.00 Known CisBP CATGCCCATATAAGGCAA Direct PWM Open · Scan
M10947_2.00 Known CisBP ATTACCATATATGGGCAT Direct PWM Open · Scan
M10951_2.00 Known CisBP GCCATATATGGCCAG Direct PWM Open · Scan
M10956_2.00 Known CisBP GGCCATATAAGGAC Direct PWM Open · Scan
SRF_HUMAN.H11MO.0.A Known HOCOMOCO TTGCCTTATATGGGCATG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 508 aa
137-221

Region 137-221 0 PWM

Residues
85 aa
Domains
PF00319 · SRF-type transcription factor (DNA-binding and dimerisation domain)
3D models
1 active PDB
Templates
1K6O
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 137-2211 model
Actions
Predicted = Low DIMER_P11831:137:221_1k6o_B_1 1k6o 137-221 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
150-197PF00319SRF-type transcription factor (DNA-binding and dimerisation domain)overlaps 137-221