ModCRE DB

Transcription factor

P12525 - MYCLP1

Putative myc-like protein MYCLP1 (Protein L-Myc-2) (V-myc myelocytomatosis viral oncogene homolog pseudogene 1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 358 aa

5 Generated PWM 11 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE5
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_sp_P12525_MYCP1_HUMAN:276:324_1hlo_B_1 ModCRE Homology model ACACACGTGCG Region 276-324 · 1 3D model Open · Scan
DIMER_sp_P12525_MYCP1_HUMAN:276:355_1nkp_A_1 ModCRE Homology model AGGCCGCACGTGCGCCCG Region 276-355 · 1 3D model Open · Scan
TFS_sp_P12525_MYCP1_HUMAN:276:352_1nlw_B_1 ModCRE Homology model AAGGCCGCGGTGCGCACG Region 276-352 · 1 3D model Open · Scan
TFS_sp_P12525_MYCP1_HUMAN:276:355_1nkp_A_1 ModCRE Homology model CGGCCGCACGTGCGGCCG Region 276-355 · 1 3D model Open · Scan
TFS_sp_P12525_MYCP1_HUMAN:276:355_1nkp_B_1 ModCRE Homology model CGGGCGCCCGTGCGCGCG Region 276-355 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 358 aa
271-355

Region 271-355 5 PWM

Residues
85 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
11 active PDBs · 10 summary rows
Templates
1HLO, 1NKP, 1NLW, 5GNJ, 5I50, 8OTS, 8OTT
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
11 active PDB models 10 summary rows
Region 271-35511 models · 10 summary rows
Actions
Predicted = Low DIMER_sp_P12525_MYCP1_HUMAN:271:355_5i50_B_1 5i50 271-355 View model · PDB
Predicted = Low DIMER_sp_P12525_MYCP1_HUMAN:276:324_1hlo_B_1 1hlo 276-324 View model · PDB
Predicted = Low DIMER_sp_P12525_MYCP1_HUMAN:276:324_8ott_M_1 8ott 276-324 View model · PDB
Predicted = Low DIMER_sp_P12525_MYCP1_HUMAN:276:355_1nkp_A_1 1nkp 276-355 View model · PDB
Predicted = Low DIMER_sp_P12525_MYCP1_HUMAN:280:349_5gnj_G_1 5gnj 280-349 View model · PDB
Predicted = Low TFS_sp_P12525_MYCP1_HUMAN:271:355_5i50_B_1 5i50 271-355 View model · PDB
Predicted = Low TFS_sp_P12525_MYCP1_HUMAN:276:324_8ott_M_1 8ott 276-324 View model · PDB
Predicted = Low TFS_sp_P12525_MYCP1_HUMAN:276:352_1nlw_B_1 1nlw 276-352 View model · PDB
Predicted = Low TFS_sp_P12525_MYCP1_HUMAN:276:353_8ots_M_1 8ots 276-353 View model · PDB
Predicted = Low TFS_sp_P12525_MYCP1_HUMAN:276:355_1nkp_A_1 1nkp 276-355 View model · PDB
Predicted = Low TFS_sp_P12525_MYCP1_HUMAN:276:355_1nkp_B_1 1nkp 276-355 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
3 8ott 271:357 276,276 324,324 P:M,N · DNA:I,J 46.9% / 71.4% 92,94 View · PDB DIMER_sp_P12525_MYCP1_HUMAN:276:324_8ott_M_1
4 8ott 271:357 276,276 324,324 P:M,N · DNA:I,J 46.9% / 71.4% 92,94 View · PDB TFS_sp_P12525_MYCP1_HUMAN:276:324_8ott_M_1
4 1hlo 271:357 276,276 324,324 P:A,B · DNA:C,D 46.9% / 67.3% 60,65 View · PDB DIMER_sp_P12525_MYCP1_HUMAN:276:324_1hlo_B_1
1 1nkp 271:357 276,276 355,355 P:A,B · DNA:F,G 38.8% / 66.2% 90,95 View · PDB TFS_sp_P12525_MYCP1_HUMAN:276:355_1nkp_B_1
1 1nkp 271:357 276,276 355,355 P:A,B · DNA:F,G 38.8% / 66.2% 90,95 View · PIR DIMER_sp_P12525_MYCP1_HUMAN:276:355_1nkp_A_1
3 8ots 271:357 276 353 P:M · DNA:I,J 38.5% / 66.7% 98 View · PDB TFS_sp_P12525_MYCP1_HUMAN:276:353_8ots_M_1
2 5i50 271:357 271,271 355,355 P:A,B · DNA:C,D 37.6% / 61.2% 92,88 View · PDB TFS_sp_P12525_MYCP1_HUMAN:271:355_5i50_B_1
2 5i50 271:357 271,271 355,355 P:A,B · DNA:C,D 37.6% / 61.2% 92,88 View · PDB DIMER_sp_P12525_MYCP1_HUMAN:271:355_5i50_B_1
5 1nlw 271:357 276 352 P:B · DNA:F,G 33.8% / 55.8% 100 View · PDB TFS_sp_P12525_MYCP1_HUMAN:276:352_1nlw_B_1
5 5gnj 271:357 280,280 349,349 P:G,I · DNA:K,L 32.9% / 52.9% 91,89 View · PDB DIMER_sp_P12525_MYCP1_HUMAN:280:349_5gnj_G_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
2-112PF01056Myc amino-terminal regionNo overlap with loaded model regions
276-327PF00010Helix-loop-helix DNA-binding domainoverlaps 271-355