ModCRE DB

Transcription factor

P13682 - ZNF35

Zinc finger protein 35 (Zinc finger protein HF.10)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 527 aa

3 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known3
MotifPredictionSourceDNA bindingSupportLogoActions
M08334_2.00 Known CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT Direct PWM Open · Scan
MA2333.1 Known JASPAR AATTCTA Direct PWM Open · Scan
M08250_2.00 Known CisBP TTGTAAGAGCTCTTTATATAT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 527 aa
219-385

Region 219-385 0 PWM

Residues
167 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5UND
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 219-3851 model
Actions
Predicted = Low TFS_P13682:219:385_5und_A_1 5und 219-385 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
222-244PF00096Zinc finger, C2H2 typeoverlaps 219-385
250-272PF00096Zinc finger, C2H2 typeoverlaps 219-385
278-300PF00096Zinc finger, C2H2 typeoverlaps 219-385
306-328PF00096Zinc finger, C2H2 typeoverlaps 219-385
334-356PF00096Zinc finger, C2H2 typeoverlaps 219-385
362-384PF00096Zinc finger, C2H2 typeoverlaps 219-385
390-412PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
418-440PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
446-468PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
474-496PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
502-524PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions