Region 177-264 0 PWM
- Residues
- 88 aa
- Domains
- PF00046 · Homeodomain
- 3D models
- 1 active PDB
- Templates
- 1B72
- Sources
- Structure model
Transcription factor
P14653 - HOXB1
Homeobox protein Hox-B1 (Homeobox protein Hox-2I)
Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 301 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known4
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M05057_2.00 | Known | CisBP | TTAATTAC | Direct PWM | Open · Scan | |
| MA2093.1 | Known | JASPAR | GTAATTA | Direct PWM | Open · Scan | |
| M05058_2.00 | Known | CisBP | GTAATTAG | Direct PWM | Open · Scan | |
| M05059_2.00 | Known | CisBP | GTAACGAT | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
301 aa
177-264
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 177-2641 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | DIMER_P14653:177:264_1b72_A_1 | 1b72 | 177-264 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 207-260 | PF00046 | Homeodomain | overlaps 177-264 |