ModCRE DB

Transcription factor

P15863 - PAX1

Paired box protein Pax-1 (HuP48)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 534 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known5
MotifPredictionSourceDNA bindingSupportLogoActions
MA0779.1 Known JASPAR CGTCACGCATGACTGCA Direct PWM Open · Scan
MA0779.2 Known JASPAR CGTCACGCATGACTGC Direct PWM Open · Scan
M03442_2.00 Known CisBP TGCAGTCATGCGTGACG Direct PWM Open · Scan
M05687_2.00 Known CisBP GCAGTCAAGCGTGACGG Direct PWM Open · Scan
M05688_2.00 Known CisBP GCAGTCAAGCGTGACGG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 534 aa
100-221

Region 100-221 0 PWM

Residues
122 aa
Domains
PF00292 · 'Paired box' domain
3D models
1 active PDB
Templates
1PDN
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 100-2211 model
Actions
Predicted = Low TFS_P15863:100:221_1pdn_C_1 1pdn 100-221 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
100-222PF00292'Paired box' domainoverlaps 100-221