ModCRE DB

Transcription factor

P15976 - GATA1

Erythroid transcription factor (Eryf1) (GATA-binding factor 1) (GATA-1) (GF-1) (NF-E1 DNA-binding protein)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 413 aa

21 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known21
MotifPredictionSourceDNA bindingSupportLogoActions
MA0035.4 Known JASPAR TTCTAATCTAT Direct PWM Open · Scan
MA0035.5 Known JASPAR CTAATCT Direct PWM Open · Scan
MA0140.2 Known JASPAR CTTATCTGTGAGGAGCAG Direct PWM Open · Scan
MA0140.3 Known JASPAR TTATCTGTGAGGAGCAG Direct PWM Open · Scan
M02738_2.00 Known CisBP GATAAGAT Direct PWM Open · Scan
M02739_2.00 Known CisBP AGATAA Direct PWM Open · Scan
M04861_2.00 Known CisBP GATAATGACATTATC Direct PWM Open · Scan
M04862_2.00 Known CisBP GATAAGGTCCTTATC Direct PWM Open · Scan
M07963_2.00 Known CisBP GCAGATAAGGA Direct PWM Open · Scan
M07964_2.00 Known CisBP CTGGGGGGGGCAGATAAG Direct PWM Open · Scan
M08202_2.00 Known CisBP CTGGTGGGGGCAGATAAGGA Direct PWM Open · Scan
M08203_2.00 Known CisBP AGATATTATC Direct PWM Open · Scan
M09115_2.00 Known CisBP CTGGCGGGGACAGATAAGA Direct PWM Open · Scan
M09549_2.00 Known CisBP CAGATAAGGA Direct PWM Open · Scan
M10577_2.00 Known CisBP CGTGATAGGG Direct PWM Open · Scan
M10578_2.00 Known CisBP GTAAAGATAGGGGA Direct PWM Open · Scan
M10579_2.00 Known CisBP AGGAAGATTACCGC Direct PWM Open · Scan
M10580_2.00 Known CisBP ATCAGATAAGGGG Direct PWM Open · Scan
M10581_2.00 Known CisBP GCAGATAACA Direct PWM Open · Scan
M10582_2.00 Known CisBP ATAGATAAGA Direct PWM Open · Scan
GATA1_HUMAN.H11MO.0.A Known HOCOMOCO CTGGCGGGGACAGATAAGA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 413 aa
201-310

Region 201-310 0 PWM

Residues
110 aa
Domains
PF00320 · GATA zinc finger PF00320 · GATA zinc finger
3D models
1 active PDB
Templates
3VD6
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 201-3101 model
Actions
Predicted = Low TFS_P15976:201:310_3vd6_C_1 3vd6 201-310 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
204-237PF00320GATA zinc fingeroverlaps 201-310
258-291PF00320GATA zinc fingeroverlaps 201-310