Transcription factor

P16415 - ZNF823

Zinc finger protein 823 (Zinc finger protein ZFP-36)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 610 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
M07733_2.00	Known	CisBP	TCTTTCTCTCTCTCC	Direct PWM		Open · Scan

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 610 aa

217-494

Residues: 278 aa
Domains: PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF13912 · C2H2-type zinc finger
3D models: 1 active PDB
Templates: 5WJQ
Sources: Structure model

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 217-4941 model

				Actions
Predicted = Low	TFS_P16415:217:494_5wjq_D_1	5wjq	217-494	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
3-42	PF01352	KRAB box	No overlap with loaded model regions
164-187	PF13912	C2H2-type zinc finger	No overlap with loaded model regions
220-242	PF00096	Zinc finger, C2H2 type	overlaps 217-494
248-270	PF00096	Zinc finger, C2H2 type	overlaps 217-494
304-326	PF00096	Zinc finger, C2H2 type	overlaps 217-494
360-382	PF00096	Zinc finger, C2H2 type	overlaps 217-494
389-410	PF00096	Zinc finger, C2H2 type	overlaps 217-494
416-438	PF00096	Zinc finger, C2H2 type	overlaps 217-494
471-493	PF13912	C2H2-type zinc finger	overlaps 217-494
499-521	PF00096	Zinc finger, C2H2 type	No overlap with loaded model regions
527-549	PF00096	Zinc finger, C2H2 type	No overlap with loaded model regions
555-577	PF00096	Zinc finger, C2H2 type	No overlap with loaded model regions
583-607	PF13912	C2H2-type zinc finger	No overlap with loaded model regions