ModCRE DB

Transcription factor

P17019 - ZNF708

Zinc finger protein 708 (Zinc finger protein 15) (Zinc finger protein 15-like 1) (Zinc finger protein KOX8)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 563 aa

85 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known5
MotifPredictionSourceDNA bindingSupportLogoActions
MA1730.1 Known JASPAR CCGGCTGTGCCTCCT Direct PWM Open · Scan
MA1730.2 Known JASPAR GCTGTGCCT Direct PWM Open · Scan
M07665_2.00 Known CisBP CGGCTGTACCTC Direct PWM Open · Scan
M08360_2.00 Known CisBP GGGCTGTACCTCCTTCTTGTC Direct PWM Open · Scan
ZN708_HUMAN.H11MO.0.C Known HOCOMOCO GCCTAATAAGCAGGTACAGC Direct PWM Open · Scan
Nearest Neighbor (>70%)6
MotifPredictionSourceDNA bindingSupportLogoActions
M08934_2.00 NN 70+% CisBP GCTGTACCTGCTTATTAGGC 85.5% identity Open · Scan
M00955_2.00 NN 70+% CisBP ACGTCCTCT 77.6% identity Open · Scan
M08381_2.00 NN 70+% CisBP ACATTTTGTCCTCCTAGTCCT 73.4% identity Open · Scan
M07687_2.00 NN 70+% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 72.3% identity Open · Scan
M07714_2.00 NN 70+% CisBP AGCCCATTGGGGCCTATGCCC 70.3% identity Open · Scan
M08921_2.00 NN 70+% CisBP CCTCATTCTTCTTGGACATG 70.2% identity Open · Scan
Nearest Neighbor (70% - 40%)74
MotifPredictionSourceDNA bindingSupportLogoActions
M07565_2.00 NN 70-40% CisBP CCTCTGGGGGCTCGTCCA 69.1% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 69.0% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 67.8% identity Open · Scan
M07715_2.00 NN 70-40% CisBP CCGCCGCCGCCGTGG 66.9% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 66.6% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 66.4% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 65.4% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 65.4% identity Open · Scan
M07586_2.00 NN 70-40% CisBP GGGACCCGGGTGGGGGCGTCCCCC 65.3% identity Open · Scan
M07575_2.00 NN 70-40% CisBP TCTCCAAGGCGGCCAGCA 65.1% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 64.7% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 64.7% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 64.2% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 64.2% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 63.6% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 63.3% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 63.0% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 62.3% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 61.9% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 61.2% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 61.1% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 61.0% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 60.5% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 59.7% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 58.9% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 58.2% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 58.1% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 57.1% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 56.9% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 56.7% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 56.1% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 55.8% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 55.7% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 55.7% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 55.4% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 55.1% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 54.9% identity Open · Scan
M04515_2.00 NN 70-40% CisBP TATGCTATAACAAGCAGCCCC 54.8% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 54.7% identity Open · Scan
M08263_2.00 NN 70-40% CisBP ATCTCGGCACTTTGGGAGGCCA 54.7% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 54.6% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 54.5% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 54.4% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 54.3% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 54.2% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 53.5% identity Open · Scan
M03686_2.00 NN 70-40% CisBP TGATTGCTCTTTT 53.4% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 53.4% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 53.4% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 53.0% identity Open · Scan
M08889_2.00 NN 70-40% CisBP GCTGCTCTTTTT 52.7% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 52.5% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 52.3% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 52.3% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 52.2% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 52.1% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 52.1% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 52.0% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 51.8% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 51.7% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 51.7% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 51.6% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 51.6% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 51.2% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 50.9% identity Open · Scan
M07717_2.00 NN 70-40% CisBP GGCTCCGCCCCC 50.9% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 50.8% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 50.7% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 50.3% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 50.3% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 50.2% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 50.2% identity Open · Scan
M00224_2.00 NN 70-40% CisBP CCCGCCCC 50.0% identity Open · Scan
M00641_2.00 NN 70-40% CisBP ATTGACCACT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 563 aa
205-358

Region 205-358 0 PWM

Residues
154 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
2I13
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 205-3581 model
Actions
Predicted = Low TFS_P17019:205:358_2i13_A_1 2i13 205-358 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
3-44PF01352KRAB boxNo overlap with loaded model regions
168-190PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
196-218PF00096Zinc finger, C2H2 typeoverlaps 205-358
224-246PF00096Zinc finger, C2H2 typeoverlaps 205-358
252-274PF00096Zinc finger, C2H2 typeoverlaps 205-358
280-302PF00096Zinc finger, C2H2 typeoverlaps 205-358
308-330PF00096Zinc finger, C2H2 typeoverlaps 205-358
336-358PF00096Zinc finger, C2H2 typeoverlaps 205-358
364-386PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
392-414PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
448-470PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
476-498PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
504-526PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
532-554PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions