ModCRE DB

Transcription factor

P17022 - ZNF18

Zinc finger protein 18 (Heart development-specific gene 1 protein) (Zinc finger protein 535) (Zinc finger protein KOX11) (Zinc finger protein with KRAB and SCAN domains 6)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 549 aa

4 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known4
MotifPredictionSourceDNA bindingSupportLogoActions
M08901_2.00 Known CisBP CCAGTTCACACC Direct PWM Open · Scan
M07602_2.00 Known CisBP GGTGTGAACTGGGGG Direct PWM Open · Scan
M08316_2.00 Known CisBP CCAGTTCACACC Direct PWM Open · Scan
ZNF18_HUMAN.H11MO.0.C Known HOCOMOCO GGTGTGAACTGG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 549 aa
405-542

Region 405-542 0 PWM

Residues
138 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5V3J
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 405-5421 model
Actions
Predicted = Low TFS_P17022:405:542_5v3j_E_1 5v3j 405-542 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
37-123PF02023SCAN domainNo overlap with loaded model regions
222-249PF01352KRAB boxNo overlap with loaded model regions
409-430PF00096Zinc finger, C2H2 typeoverlaps 405-542
436-458PF00096Zinc finger, C2H2 typeoverlaps 405-542
464-486PF00096Zinc finger, C2H2 typeoverlaps 405-542
492-514PF00096Zinc finger, C2H2 typeoverlaps 405-542
520-542PF00096Zinc finger, C2H2 typeoverlaps 405-542