ModCRE DB

Transcription factor

P17509 - HOXB6

Homeobox protein Hox-B6 (Homeobox protein Hox-2.2) (Homeobox protein Hox-2B) (Homeobox protein Hu-2)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 224 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known5
MotifPredictionSourceDNA bindingSupportLogoActions
MA1500.1 Known JASPAR TTAATTAC Direct PWM Open · Scan
MA1500.2 Known JASPAR TAATTAC Direct PWM Open · Scan
M04999_2.00 Known CisBP TTAATTAC Direct PWM Open · Scan
M05000_2.00 Known CisBP TTAACGAC Direct PWM Open · Scan
M05001_2.00 Known CisBP TTAATTAC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 224 aa
127-206

Region 127-206 0 PWM

Residues
80 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
2R5Y
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 127-2061 model
Actions
Predicted = Low DIMER_P17509:127:206_2r5y_A_1 2r5y 127-206 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
147-203PF00046Homeodomainoverlaps 127-206