ModCRE DB

Transcription factor

P17676 - CEBPB

CCAAT/enhancer-binding protein beta (C/EBP beta) (Liver activator protein) (LAP) (Liver-enriched inhibitory protein) (LIP) (Nuclear factor NF-IL6) (Transcription factor 5) (TCF-5)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 345 aa

16 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known16
MotifPredictionSourceDNA bindingSupportLogoActions
MA0466.1 Known JASPAR TATTGCACAAT Direct PWM Open · Scan
MA0466.2 Known JASPAR ATTGCGCAAT Direct PWM Open · Scan
MA0466.3 Known JASPAR TATTGCGCAATA Direct PWM Open · Scan
MA0466.4 Known JASPAR ATTGCGCAAT Direct PWM Open · Scan
M02851_2.00 Known CisBP ATTGCGCAAT Direct PWM Open · Scan
M02852_2.00 Known CisBP ATTGCGCAAT Direct PWM Open · Scan
M04331_2.00 Known CisBP CATTACGCAACC Direct PWM Open · Scan
M04332_2.00 Known CisBP TATTACGCAATA Direct PWM Open · Scan
M05840_2.00 Known CisBP ATTGCGCAATA Direct PWM Open · Scan
M07830_2.00 Known CisBP AGGATTGTGCAATA Direct PWM Open · Scan
M07831_2.00 Known CisBP ATTGTGCAATC Direct PWM Open · Scan
M07832_2.00 Known CisBP GATTGTGCAATACC Direct PWM Open · Scan
M08804_2.00 Known CisBP GATTGTGCAATA Direct PWM Open · Scan
M09993_2.00 Known CisBP AGATTGTGCAATGT Direct PWM Open · Scan
M09994_2.00 Known CisBP CAGTTGCGCAATAT Direct PWM Open · Scan
CEBPB_HUMAN.H11MO.0.A Known HOCOMOCO GATTGTGCAATA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 345 aa
268-334

Region 268-334 0 PWM

Residues
67 aa
Domains
PF07716 · Basic region leucine zipper
3D models
1 active PDB
Templates
1GTW
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 268-3341 model
Actions
Predicted = Low DIMER_P17676:268:334_1gtw_B_1 1gtw 268-334 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
271-323PF07716Basic region leucine zipperoverlaps 268-334