ModCRE DB

Transcription factor

P19544 - WT1

Wilms tumor protein (WT33)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 449 aa

67 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known8
MotifPredictionSourceDNA bindingSupportLogoActions
M00243_2.00 Known CisBP CCCACAC Direct PWM Open · Scan
M00244_2.00 Known CisBP TTAAAATATATA Direct PWM Open · Scan
M00245_2.00 Known CisBP TCCACAC Direct PWM Open · Scan
M00246_2.00 Known CisBP TCCACAC Direct PWM Open · Scan
M00247_2.00 Known CisBP ATATATTATTT Direct PWM Open · Scan
M00248_2.00 Known CisBP AATATTATATGTA Direct PWM Open · Scan
M08937_2.00 Known CisBP CCCCCCCTCCTCCCCCGCCC Direct PWM Open · Scan
WT1_HUMAN.H11MO.0.C Known HOCOMOCO GGGCGGGGGAGGAGGGGGGG Direct PWM Open · Scan
Nearest Neighbor (>70%)3
MotifPredictionSourceDNA bindingSupportLogoActions
MA1627.1 NN 70+% JASPAR CCCCTCCCCCACAC 96.2% identity Open · Scan
M00249_2.00 NN 70+% CisBP ACTCCCCCGCA 94.0% identity Open · Scan
M08968_2.00 NN 70+% CisBP CCCCCCCTCCTCCCCCGCCC 93.1% identity Open · Scan
Nearest Neighbor (70% - 40%)56
MotifPredictionSourceDNA bindingSupportLogoActions
M06072_2.00 NN 70-40% CisBP CCACGCCCACGCAC 64.0% identity Open · Scan
M09515_2.00 NN 70-40% CisBP CCCGCCCACGCA 62.6% identity Open · Scan
MA0472.1 NN 70-40% JASPAR CCCCCGCCCACGCAC 62.6% identity Open · Scan
MA0472.2 NN 70-40% JASPAR ACGCCCACGCA 62.6% identity Open · Scan
MA0732.1 NN 70-40% JASPAR CTACGCCCACGCACT 61.7% identity Open · Scan
MA0162.1 NN 70-40% JASPAR TGCGTGGGCGG 61.0% identity Open · Scan
MA0162.2 NN 70-40% JASPAR CCCCCGCCCCCGCC 61.0% identity Open · Scan
M06169_2.00 NN 70-40% CisBP GCCACGCCCAAC 60.4% identity Open · Scan
M00224_2.00 NN 70-40% CisBP CCCGCCCC 59.2% identity Open · Scan
M04463_2.00 NN 70-40% CisBP CACCACGCCCA 59.2% identity Open · Scan
MA0039.1 NN 70-40% JASPAR TAAAGGAAGG 59.2% identity Open · Scan
MA0039.3 NN 70-40% JASPAR CCACACCCTGC 59.2% identity Open · Scan
MA1513.1 NN 70-40% JASPAR GCCCCGCCCCC 58.0% identity Open · Scan
MA1515.1 NN 70-40% JASPAR CACCACGCCCA 58.0% identity Open · Scan
MA0733.1 NN 70-40% JASPAR TTACGCCCACGCATTT 57.9% identity Open · Scan
M04430_2.00 NN 70-40% CisBP GACCACGCCCA 57.8% identity Open · Scan
MA0742.1 NN 70-40% JASPAR GACCACGCCCTTATT 57.8% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 56.9% identity Open · Scan
M00632_2.00 NN 70-40% CisBP ACACGCCCCT 56.5% identity Open · Scan
MA0599.1 NN 70-40% JASPAR GCCCCGCCCC 56.3% identity Open · Scan
M00777_2.00 NN 70-40% CisBP ACCGTTAT 56.1% identity Open · Scan
M00645_2.00 NN 70-40% CisBP CGCCCACGCA 56.0% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 55.8% identity Open · Scan
MA1517.1 NN 70-40% JASPAR GGCCACGCCCA 55.4% identity Open · Scan
M01192_2.00 NN 70-40% CisBP CCCCCTGA 55.3% identity Open · Scan
M08525_2.00 NN 70-40% CisBP CCCCGCA 55.1% identity Open · Scan
M00617_2.00 NN 70-40% CisBP CCACGCCCA 54.8% identity Open · Scan
M01042_2.00 NN 70-40% CisBP TGGGACCTGA 54.7% identity Open · Scan
M04555_2.00 NN 70-40% CisBP GCCACGCCCCCGCCACGCCCAC 54.5% identity Open · Scan
MA1512.1 NN 70-40% JASPAR GCCACGCCCAC 54.5% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 54.4% identity Open · Scan
M03682_2.00 NN 70-40% CisBP ACGCCACGCCCAGT 54.2% identity Open · Scan
MA0747.1 NN 70-40% JASPAR GCCACGCCCACT 54.2% identity Open · Scan
MA1564.1 NN 70-40% JASPAR GCCACGCCCCCC 54.2% identity Open · Scan
M01035_2.00 NN 70-40% CisBP CCCCCTTAAT 54.1% identity Open · Scan
MA1516.1 NN 70-40% JASPAR GACCACGCCCA 53.9% identity Open · Scan
M08246_2.00 NN 70-40% CisBP GCCCCACCCA 52.8% identity Open · Scan
MA1511.1 NN 70-40% JASPAR GCCACACCCCC 52.8% identity Open · Scan
M02903_2.00 NN 70-40% CisBP ATGCCACGCCCCTTTTTG 52.6% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 52.4% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 52.2% identity Open · Scan
M01180_2.00 NN 70-40% CisBP ACCCCTGG 52.1% identity Open · Scan
MA0740.1 NN 70-40% JASPAR GGCCACGCCCCCTT 52.1% identity Open · Scan
M09008_2.00 NN 70-40% CisBP CCCGGCCCCACCCT 51.9% identity Open · Scan
MA0493.1 NN 70-40% JASPAR GGCCACACCCA 51.9% identity Open · Scan
M08528_2.00 NN 70-40% CisBP ACCCCACTTTTTTG 51.7% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 51.4% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 51.1% identity Open · Scan
M06466_2.00 NN 70-40% CisBP TCCGCCCCCT 51.1% identity Open · Scan
M01039_2.00 NN 70-40% CisBP CCCCCTA 50.8% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 50.0% identity Open · Scan
M01033_2.00 NN 70-40% CisBP CCCCTATTT 50.0% identity Open · Scan
M01036_2.00 NN 70-40% CisBP ACCCCTATTT 50.0% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 50.0% identity Open · Scan
MA0516.1 NN 70-40% JASPAR GCCCCGCCCCCTCCC 50.0% identity Open · Scan
MA0748.1 NN 70-40% JASPAR GTCCGCCATTA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 449 aa
350-440

Region 350-440 0 PWM

Residues
91 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
1P47
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 350-4401 model
Actions
Predicted = Low TFS_P19544:350:440_1p47_A_1 1p47 350-440 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
1-321PF02165Wilm's tumour proteinNo overlap with loaded model regions
353-377PF00096Zinc finger, C2H2 typeoverlaps 350-440
383-405PF00096Zinc finger, C2H2 typeoverlaps 350-440
414-438PF00096Zinc finger, C2H2 typeoverlaps 350-440