ModCRE DB

Transcription factor

P21506 - ZNF10

Zinc finger protein 10 (Zinc finger protein KOX1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 573 aa

66 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M07774_2.00 Known CisBP CCCTACCTC Direct PWM Open · Scan
Nearest Neighbor (>70%)8
MotifPredictionSourceDNA bindingSupportLogoActions
M00943_2.00 NN 70+% CisBP CCCGCTGC 71.4% identity Open · Scan
M00944_2.00 NN 70+% CisBP TCGCTATAA 71.4% identity Open · Scan
M00960_2.00 NN 70+% CisBP TGCATCCC 71.4% identity Open · Scan
M00952_2.00 NN 70+% CisBP GGATGCTC 70.5% identity Open · Scan
M00959_2.00 NN 70+% CisBP GCCCTCCC 70.5% identity Open · Scan
M00948_2.00 NN 70+% CisBP GCAGCACC 70.2% identity Open · Scan
M00950_2.00 NN 70+% CisBP GCAGCCCA 70.2% identity Open · Scan
M00953_2.00 NN 70+% CisBP ATCTATAT 70.2% identity Open · Scan
Nearest Neighbor (70% - 40%)57
MotifPredictionSourceDNA bindingSupportLogoActions
M00939_2.00 NN 70-40% CisBP CCACCTCA 67.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 67.8% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 63.4% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 63.0% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 62.0% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 61.9% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 60.3% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 60.0% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 59.1% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 58.7% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 57.3% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 57.2% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 56.9% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 56.6% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 56.3% identity Open · Scan
M07706_2.00 NN 70-40% CisBP GTCTTTGAGAGGGCCCAGATGTTGGACTTA 55.8% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 55.5% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 55.2% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 55.2% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 55.0% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 54.3% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 54.2% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 54.0% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 54.0% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 53.9% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 53.8% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 53.1% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.1% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 53.0% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 53.0% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 52.7% identity Open · Scan
MA0740.1 NN 70-40% JASPAR GGCCACGCCCCCTT 52.6% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 52.5% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 52.5% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 52.2% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 52.1% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 52.1% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 52.0% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 51.9% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 51.8% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 51.7% identity Open · Scan
M08525_2.00 NN 70-40% CisBP CCCCGCA 51.7% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 51.6% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 51.4% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 51.2% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 51.1% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 51.1% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 50.7% identity Open · Scan
MA0741.1 NN 70-40% JASPAR GCCACGCCCCC 50.6% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 50.5% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 50.5% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 50.3% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 50.1% identity Open · Scan
M01529_2.00 NN 70-40% CisBP CCCCGCATT 50.0% identity Open · Scan
M07657_2.00 NN 70-40% CisBP CCCCTGCATGTCCCCATTTTT 50.0% identity Open · Scan
M08540_2.00 NN 70-40% CisBP CCCCT 50.0% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 573 aa
262-540

Region 262-540 0 PWM

Residues
279 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 262-5401 model
Actions
Predicted = Low TFS_P21506:262:540_5wjq_D_1 5wjq 262-540 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
13-54PF01352KRAB boxNo overlap with loaded model regions
265-287PF00096Zinc finger, C2H2 typeoverlaps 262-540
293-315PF00096Zinc finger, C2H2 typeoverlaps 262-540
321-343PF00096Zinc finger, C2H2 typeoverlaps 262-540
364-388PF13465Zinc-finger double domainoverlaps 262-540
405-427PF00096Zinc finger, C2H2 typeoverlaps 262-540
433-455PF00096Zinc finger, C2H2 typeoverlaps 262-540
461-483PF00096Zinc finger, C2H2 typeoverlaps 262-540
489-511PF00096Zinc finger, C2H2 typeoverlaps 262-540
517-539PF00096Zinc finger, C2H2 typeoverlaps 262-540