Region 262-294 0 PWM
- Residues
- 33 aa
- Domains
- No overlapping PFAM annotation recorded
- 3D models
- 1 active PDB
- Templates
- 3QRF
- Sources
- Structure model
Transcription factor
P21675 - TAF1
Transcription initiation factor TFIID subunit 1 (EC 2.3.1.48) (EC 2.7.11.1) (Cell cycle gene 1 protein) (TBP-associated factor 250 kDa) (p250) (Transcription initiation factor TFIID 250 kDa subunit) (TAF(II)250) (TAFII-250) (TAFII250)
Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 1893 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TAF1_HUMAN.H11MO.0.A | Known | HOCOMOCO | AAGATGGCGGCGGCGG | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
1893 aa
262-294
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 262-2941 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | DIMER_P21675:262:294_3qrf_G_1 | 3qrf | 262-294 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 26-86 | PF09247 | TATA box-binding protein binding | No overlap with loaded model regions |
| 586-1048 | PF12157 | Protein of unknown function (DUF3591) | No overlap with loaded model regions |
| 1282-1323 | PF15288 | Zinc knuckle | No overlap with loaded model regions |
| 1411-1491 | PF00439 | Bromodomain | No overlap with loaded model regions |
| 1537-1616 | PF00439 | Bromodomain | No overlap with loaded model regions |