ModCRE DB

Transcription factor

P22415 - USF1

Upstream stimulatory factor 1 (Class B basic helix-loop-helix protein 11) (bHLHb11) (Major late transcription factor 1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 310 aa

19 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known19
MotifPredictionSourceDNA bindingSupportLogoActions
MA0093.1 Known JASPAR CACGTGG Direct PWM Open · Scan
MA0093.2 Known JASPAR GCCACGTGACC Direct PWM Open · Scan
MA0093.3 Known JASPAR TGGTCATGTGACCT Direct PWM Open · Scan
MA0093.4 Known JASPAR GTCATGTGAC Direct PWM Open · Scan
M02792_2.00 Known CisBP ATCACGTGAC Direct PWM Open · Scan
M04146_2.00 Known CisBP CCCACGTGACC Direct PWM Open · Scan
M04147_2.00 Known CisBP ACCATGTGACC Direct PWM Open · Scan
M07807_2.00 Known CisBP GGTCACGTGACCGGG Direct PWM Open · Scan
M07808_2.00 Known CisBP GGGTCACGTGGCGGG Direct PWM Open · Scan
M07809_2.00 Known CisBP GGTCACGTGGCCGCG Direct PWM Open · Scan
M07810_2.00 Known CisBP GGTCACGTGGC Direct PWM Open · Scan
M07811_2.00 Known CisBP GGGTCACGTGGCCG Direct PWM Open · Scan
M08056_2.00 Known CisBP GGTCACGTGGC Direct PWM Open · Scan
M08733_2.00 Known CisBP GGTCACGTGACC Direct PWM Open · Scan
M09460_2.00 Known CisBP TCACGTGACC Direct PWM Open · Scan
M09867_2.00 Known CisBP AGATCACGTGATCT Direct PWM Open · Scan
M09868_2.00 Known CisBP AAATCACGTGATAT Direct PWM Open · Scan
M09869_2.00 Known CisBP CCACGTGC Direct PWM Open · Scan
USF1_HUMAN.H11MO.0.A Known HOCOMOCO GGTCACGTGACC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 310 aa
195-264

Region 195-264 0 PWM

Residues
70 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
1AM9
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 195-2641 model
Actions
Predicted = Low DIMER_P22415:195:264_1am9_B_1 1am9 195-264 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
200-255PF00010Helix-loop-helix DNA-binding domainoverlaps 195-264