ModCRE DB

Transcription factor

P22736 - NR4A1

Nuclear receptor subfamily 4immunitygroup A member 1 (Early response protein NAK1) (Nuclear hormone receptor NUR/77) (Nur77) (Orphan nuclear receptor HMR) (Orphan nuclear receptor TR3) (ST-59) (Testicular receptor 3)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 598 aa

11 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known11
MotifPredictionSourceDNA bindingSupportLogoActions
MA1112.1 Known JASPAR AAAAGGTCAC Direct PWM Open · Scan
MA1112.2 Known JASPAR TTAAAGGTCAAA Direct PWM Open · Scan
MA1112.3 Known JASPAR AAAGGTCA Direct PWM Open · Scan
M05601_2.00 Known CisBP TAAAGGTCAC Direct PWM Open · Scan
M05602_2.00 Known CisBP TAAAGGTCAA Direct PWM Open · Scan
M05603_2.00 Known CisBP TAAAGGTCAA Direct PWM Open · Scan
M05604_2.00 Known CisBP TAAAGGTCAC Direct PWM Open · Scan
M08153_2.00 Known CisBP AAAAGGTCAC Direct PWM Open · Scan
M09274_2.00 Known CisBP AAAGGTCAG Direct PWM Open · Scan
M09608_2.00 Known CisBP AGGTAAAGGTCA Direct PWM Open · Scan
NR4A1_HUMAN.H11MO.0.A Known HOCOMOCO AAAGGTCAG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 598 aa
267-338

Region 267-338 0 PWM

Residues
72 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
1 active PDB
Templates
1R0N
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 267-3381 model
Actions
Predicted = Low DIMER_P22736:267:338_1r0n_A_1 1r0n 267-338 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
266-334PF00105Double treble clef zinc finger, C4 typeoverlaps 267-338
402-578PF00104Ligand-binding domain of nuclear hormone receptorNo overlap with loaded model regions