ModCRE DB

Transcription factor

P23409 - MYF6

Myogenic factor 6 (Myf-6) (Class C basic helix-loop-helix protein 4) (bHLHc4) (Muscle-specific regulatory factor 4)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 242 aa

9 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known9
MotifPredictionSourceDNA bindingSupportLogoActions
MA0667.1 Known JASPAR AACAGCTGTT Direct PWM Open · Scan
M02780_2.00 Known CisBP AACAGCTGTT Direct PWM Open · Scan
M04084_2.00 Known CisBP CAACAGCTGACG Direct PWM Open · Scan
M04085_2.00 Known CisBP GAACAGCTGTCG Direct PWM Open · Scan
M04086_2.00 Known CisBP CAACAGCTGACG Direct PWM Open · Scan
M04087_2.00 Known CisBP CAACAGCTGTCG Direct PWM Open · Scan
M05831_2.00 Known CisBP TAACAGTTGTT Direct PWM Open · Scan
M08717_2.00 Known CisBP CAGCTGC Direct PWM Open · Scan
MYF6_HUMAN.H11MO.0.C Known HOCOMOCO CAGCTGC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 242 aa
86-148

Region 86-148 0 PWM

Residues
63 aa
Domains
PF01586 · Myogenic Basic domain PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
1MDY
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 86-1481 model
Actions
Predicted = Low DIMER_P23409:86:148_1mdy_A_1 1mdy 86-148 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
3-93PF01586Myogenic Basic domainoverlaps 86-148
94-145PF00010Helix-loop-helix DNA-binding domainoverlaps 86-148