ModCRE DB

Transcription factor

P23511 - NFYA

Nuclear transcription factor Y subunit alpha (CAAT box DNA-binding protein subunit A) (Nuclear transcription factor Y subunit A) (NF-YA)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 347 aa

8 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known8
MotifPredictionSourceDNA bindingSupportLogoActions
MA0060.1 Known JASPAR CTCAGCCAATCAGCGC Direct PWM Open · Scan
MA0060.2 Known JASPAR AGAGTGCTGATTGGTCCA Direct PWM Open · Scan
MA0060.3 Known JASPAR AACCAATCAGA Direct PWM Open · Scan
MA0060.4 Known JASPAR CCAATCAG Direct PWM Open · Scan
M08104_2.00 Known CisBP TCTGATTGGTT Direct PWM Open · Scan
M09018_2.00 Known CisBP TTCTGATTGGCTGA Direct PWM Open · Scan
M10405_2.00 Known CisBP TCTGATTGGTTAGT Direct PWM Open · Scan
NFYA_HUMAN.H11MO.0.A Known HOCOMOCO TCAGCCAATCAGAA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 347 aa
140-186

Region 140-186 0 PWM

Residues
47 aa
Domains
No overlapping PFAM annotation recorded
3D models
1 active PDB
Templates
6CRO
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 140-1861 model
Actions
Predicted = Low TFS_P23511:140:186_6cro_A_1 6cro 140-186 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
248-331PF02045CCAAT-binding transcription factor (CBF-B/NF-YA) subunit BNo overlap with loaded model regions